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SCNpilot_cont_750_bf_scaffold_1872

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1872_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..313)
DNA (312bp) protein (104aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN21_9GAMM
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:AHX13797.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative amidohydrolase
SCNpilot_cont_750_bf_scaffold_1872_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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395..1675
DNA (1281bp) protein (427aa)
formimidoylglutamate deiminase (EC:3.5.3.13)
N-formimino-L-glutamate deiminase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN20_9GAMM
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:EIL88611.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_bf_scaffold_1872_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1765..2496
DNA (732bp) protein (244aa)
ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WE48_9GAMM rbh
ABC-type antimicrobial peptide transport system, ATPase component rbh
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGG89457.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2493..4859
DNA (2367bp) protein (789aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NP75_9GAMM rbh
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGG89456.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ABC-type transport system, involved in lipoprotein release, permease component rbh
SCNpilot_cont_750_bf_scaffold_1872_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4870..6069
DNA (1200bp) protein (400aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NF11_9GAMM rbh
RND family efflux transporter, MFP subunit rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG89455.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6187..6591
DNA (405bp) protein (135aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS07_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89454.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6731..7717
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS08_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89453.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7798..8247
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS09_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89452.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8306..9574
DNA (1269bp) protein (423aa)
Major facilitator family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W017_9GAMM rbh
arabinose efflux permease family protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_1872_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9652..10203)
DNA (552bp) protein (184aa)
Nucleotide pyrophosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS11_9GAMM
putative AP superfamily protein
Putative AP superfamily protein {ECO:0000313|EMBL:AGG89450.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10925..11341
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS12_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89449.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11342..11875)
DNA (534bp) protein (178aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGF5_9GAMM
O-6-methylguanine DNA methyltransferase
SCNpilot_cont_750_bf_scaffold_1872_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11872..13368)
DNA (1497bp) protein (499aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.21 2.1.1.63)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:AGG89447.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AGG89447.1};; EC=3.2.2.21 {ECO:0000313|EMBL:AGG89447.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NH75_9GAMM
SCNpilot_cont_750_bf_scaffold_1872_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13418..13975)
DNA (558bp) protein (186aa)
Ketosteroid isomerase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W012_9GAMM
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EIL92803.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ketosteroid isomerase-like enzyme
SCNpilot_cont_750_bf_scaffold_1872_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14303..14869)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS15_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89445.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1872_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15104..15556
DNA (453bp) protein (151aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPD1_9GAMM
Displaying 16 items

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