ggKbase home page

SCNpilot_cont_750_bf_scaffold_1941

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1941_1
unknown

Not on your lists

comp(71..352)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1941_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

374..631
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCY8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73383.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_1941_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

704..865
DNA (162bp) protein (54aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCU62526.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CCU62526.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CCU62526.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
copper-translocating P-type ATPase (EC:3.6.3.4)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW6_9PROT
SCNpilot_cont_750_bf_scaffold_1941_4
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(896..1516)
DNA (621bp) protein (207aa)
Cation efflux protein n=2 Tax=Nitrosococcus oceani RepID=Q3JAX8_NITOC rbh
cation efflux protein rbh
Cation efflux protein {ECO:0000313|EMBL:ABA58018.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
SCNpilot_cont_750_bf_scaffold_1941_5
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1885..2283)
DNA (399bp) protein (133aa)
MerR family transcriptional regulator n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000366199C
merR; Mercuric resistance operon regulatory protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_cont_750_bf_scaffold_1941_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2361..2708
DNA (348bp) protein (116aa)
mercury transporter MerT n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036B4C41
Mercury transporter MerT {ECO:0000313|EMBL:KGH30749.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
merT; Mercuric transport protein (Mercury ion transport protein)
SCNpilot_cont_750_bf_scaffold_1941_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2718..2996
DNA (279bp) protein (93aa)
mercury transporter n=1 Tax=Bordetella sp. FB-8 RepID=UPI00038244FB
merP; Mercuric transport protein periplasmic component precursor (Periplasmic mercury ion-binding protein) (Mercury scavenger protein)
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCNpilot_cont_750_bf_scaffold_1941_8

Not on your lists

3664..4650
DNA (987bp) protein (329aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003816BE9
Uncharacterized protein {ECO:0000313|EMBL:KKN74138.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_750_bf_scaffold_1941_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4911..5933)
DNA (1023bp) protein (341aa)
Putative efflux protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CT7_DECAR rbh
Putative efflux protein {ECO:0000313|EMBL:CDW96502.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
efflux protein rbh
SCNpilot_cont_750_bf_scaffold_1941_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5930..7219)
DNA (1290bp) protein (430aa)
Arsenical pump membrane protein n=2 Tax=Alcaligenes faecalis RepID=J0ULV1_ALCFA
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993, ECO:0000313|EMBL:KIO49027.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
arsenical pump membrane protein; K03893 arsenical pump membrane protein
SCNpilot_cont_750_bf_scaffold_1941_11
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7301..7687)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHQ9_GALCS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
SCNpilot_cont_750_bf_scaffold_1941_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7724..8266)
DNA (543bp) protein (181aa)
arsenate reductase; K03741 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000313|EMBL:KIO49026.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
protein tyrosine phosphatase id=12498426 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_cont_750_bf_scaffold_1941_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8227..8670)
DNA (444bp) protein (148aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RC50_CUPTR
Glyoxalase {ECO:0000313|EMBL:KIO49025.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_750_bf_scaffold_1941_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8681..9046)
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIA2_9PROT
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIO49024.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
arsR; transcription regulator protein, arsenical resistance operon repressor
Displaying 14 items

View Taxonomy