ggKbase home page

SCNpilot_cont_750_bf_scaffold_1972

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1972_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..991
DNA (990bp) protein (330aa)
Flagellar M-ring protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AS5_RHOPB
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF
SCNpilot_cont_750_bf_scaffold_1972_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

988..1590
DNA (603bp) protein (201aa)
Flagellar M-ring protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRR1_9BRAD
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF
SCNpilot_cont_750_bf_scaffold_1972_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1593..2612
DNA (1020bp) protein (340aa)
Flagellar motor switch protein FliG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC0_NITHX
fliG; flagellar motor switch protein G; K02410 flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1972_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2612..3250
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TNU3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE08131.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
fliH; flagellar assembly protein H; K02411 flagellar assembly protein FliH
SCNpilot_cont_750_bf_scaffold_1972_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3247..3597
DNA (351bp) protein (117aa)
Flagellar motor switch FliN n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AS2_RHOPB
Flagellar motor switch protein {ECO:0000313|EMBL:KIZ42710.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
flagellar motor switch protein; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_cont_750_bf_scaffold_1972_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3649..5034
DNA (1386bp) protein (462aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AS1_RHOPB
ATPase AAA {ECO:0000313|EMBL:KJC59619.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
two component sigma54 specific Fis family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1972_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5037..5216)
DNA (180bp) protein (60aa)
Metallo-beta-lactamase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HF80_9BRAD
Metallo-beta-lactamase {ECO:0000313|EMBL:ERF83468.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1972_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5359..6468
DNA (1110bp) protein (370aa)
exodeoxyribonuclease V; K01144 exodeoxyribonuclease V [EC:3.1.11.5]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030F8741
Uncharacterized protein {ECO:0000313|EMBL:EKS41092.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_1972_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6622..6990
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61572.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1972_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7204..7914
DNA (711bp) protein (237aa)
msrA; methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G159_9BRAD
SCNpilot_cont_750_bf_scaffold_1972_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7991..8404
DNA (414bp) protein (138aa)
methionine sulfoxide reductase B; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZY2_RHOP2
SCNpilot_cont_750_bf_scaffold_1972_12
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8717..8992
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZF15_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM92081.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_750_bf_scaffold_1972_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9004..9456)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000371C1B1
Uncharacterized protein {ECO:0000313|EMBL:BAR58368.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1972_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9620..10828)
DNA (1209bp) protein (403aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2Z9_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS36957.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
diguanylate cyclase
SCNpilot_cont_750_bf_scaffold_1972_15
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11047..11289)
DNA (243bp) protein (81aa)
nitroreductase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B79930
Nitroreductase {ECO:0000313|EMBL:KJE36168.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
nitroreductase family protein
Displaying 15 items

View Taxonomy