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SCNpilot_cont_750_bf_scaffold_340

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_340_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1286
DNA (1284bp) protein (428aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205) rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFR1_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_340_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1378..2553
DNA (1176bp) protein (392aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
GMP synthase (glutamine-hydrolyzing) (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WID5_9GAMM
SCNpilot_cont_750_bf_scaffold_340_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2493..2882
DNA (390bp) protein (130aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
Glutamine amidotransferase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCC9_9XANT
SCNpilot_cont_750_bf_scaffold_340_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2963..3451
DNA (489bp) protein (163aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cytosine/adenosine deaminase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTC3_9GAMM
cytosine/adenosine deaminase
SCNpilot_cont_750_bf_scaffold_340_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3956..5506
DNA (1551bp) protein (517aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4]
Putative thymidine phosphorylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=TYPH_POLSJ
SCNpilot_cont_750_bf_scaffold_340_6
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5503..6396
DNA (894bp) protein (298aa)
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:KFI08286.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KFI08286.1};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003650AE9
SCNpilot_cont_750_bf_scaffold_340_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6519..6722
DNA (204bp) protein (68aa)
Uncharacterized protein n=8 Tax=Stenotrophomonas maltophilia RepID=B2FQI6_STRMK
Uncharacterized protein {ECO:0000313|EMBL:EZP44931.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein; K09165 hypothetical protein
SCNpilot_cont_750_bf_scaffold_340_8
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6790..7467)
DNA (678bp) protein (226aa)
hypothetical protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
Phosphonate-transporting ATPase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E3X4_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGP63203.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
SCNpilot_cont_750_bf_scaffold_340_9
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..8711)
DNA (1248bp) protein (416aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P931_DESSD rbh
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AHE65920.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
ABC-type transport system, involved in lipoprotein release, permease component rbh
SCNpilot_cont_750_bf_scaffold_340_10
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8708..9793)
DNA (1086bp) protein (362aa)
Membrane fusion protein n=2 Tax=Legionella pneumophila RepID=G8UT28_LEGPN
Membrane protein {ECO:0000313|EMBL:KGP63201.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
membrane fusion protein
SCNpilot_cont_750_bf_scaffold_340_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10016..11080)
DNA (1065bp) protein (355aa)
ribonucleoside reductase (EC:1.17.4.-); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372B9EB
Uncharacterized protein {ECO:0000313|EMBL:AHX16254.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_340_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11270..11992
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362D5F4
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AHX13317.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
transcription regulator protein, Crp/Fnr family; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_cont_750_bf_scaffold_340_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11999..14044)
DNA (2046bp) protein (682aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034919E3 rbh
Histidine kinase {ECO:0000313|EMBL:AHX13318.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
multi-sensor hybrid histidine kinase
SCNpilot_cont_750_bf_scaffold_340_14
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14045..14773)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344DA41
winged helix family two component transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_750_bf_scaffold_340_15
bacterium YEK0313, Bacteria

Not on your lists

15346..16473
DNA (1128bp) protein (376aa)
cydA; cytochrome d terminal oxidase subunit I (EC:1.9.3.-); K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome d terminal oxidase, subunit I n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHU3_HYPSM
Cytochrome bd-I ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:CEJ14948.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_340_16
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16504..16632
DNA (129bp) protein (43aa)
Cyd operon protein YbgT n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN43_9GAMM
Cyd operon protein YbgT {ECO:0000313|EMBL:EYR70231.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
cyd operon protein YbgT
SCNpilot_cont_750_bf_scaffold_340_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16729..17724
DNA (996bp) protein (332aa)
zinc-binding alcohol dehydrogenase family protein; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
alcohol dehydrogenase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003677224
Alcohol dehydrogenase {ECO:0000313|EMBL:AHX14362.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_340_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17818..18468
DNA (651bp) protein (217aa)
Transport-associated protein n=1 Tax=Halomonas titanicae BH1 RepID=L9UDC5_9GAMM
OsmY domain-containing protein {ECO:0000313|EMBL:AHX13327.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
periplasmic or secreted lipoprotein
SCNpilot_cont_750_bf_scaffold_340_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18671..19108)
DNA (438bp) protein (146aa)
Universal stress protein UspA-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NNJ9_9GAMM
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AGG89271.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_340_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19162..19995)
DNA (834bp) protein (278aa)
Universal stress protein UspA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG43_9GAMM
Universal stress protein UspA {ECO:0000313|EMBL:AHX13307.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
universal stress protein UspA-like protein
SCNpilot_cont_750_bf_scaffold_340_21
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20026..20232)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSA2_STRM5
hypothetical protein; K09165 hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_750_bf_scaffold_340_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20398..21117
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000379B5ED
Uncharacterized protein {ECO:0000313|EMBL:AHX14359.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cbs domain containing protein
SCNpilot_cont_750_bf_scaffold_340_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21339..21770)
DNA (432bp) protein (144aa)
Protein required for attachment to host cells n=1 Tax=Rhodanobacter denitrificans RepID=M4ND22_9GAMM
protein required for attachment to host cells
Protein required for attachment to host cells {ECO:0000313|EMBL:AGG87737.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_340_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22013..22609
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346C5A8
Membrane protein {ECO:0000313|EMBL:AHX13329.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative outer membrane protein
SCNpilot_cont_750_bf_scaffold_340_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22616..23950
DNA (1335bp) protein (445aa)
Putative phosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLG0_9GAMM rbh
Phosphoribosyl transferase {ECO:0000313|EMBL:AHX13304.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative phosphoribosyltransferase rbh
SCNpilot_cont_750_bf_scaffold_340_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24075..24521
DNA (447bp) protein (149aa)
HSP20/alpha crystallin family protein, molecular chaperone (Small heat shock protein) n=1 Tax=Rhodanobacter denitrificans RepID=I4WQG2_9GAMM
Heat-shock protein Hsp20 {ECO:0000313|EMBL:AHX13305.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
molecular chaperone (small heat shock protein)
SCNpilot_cont_750_bf_scaffold_340_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24580..25884
DNA (1305bp) protein (435aa)
Erythromycin esterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLM2_9GAMM
Erythromycin esterase {ECO:0000313|EMBL:AHX13306.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
erythromycin esterase-like enzyme
SCNpilot_cont_750_bf_scaffold_340_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25918..26367)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAW9_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13308.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_340_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26364..27026)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA78E
Nitroreductase {ECO:0000313|EMBL:AHX13309.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
nitroreductase
SCNpilot_cont_750_bf_scaffold_340_30
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27419..27937)
DNA (519bp) protein (173aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXP1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Displaying items 1-30 of 76 in total

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