ggKbase home page

SCNpilot_cont_750_bf_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_468_1
unknown

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00035EA15C
SCNpilot_cont_750_bf_scaffold_468_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234..1484)
DNA (1251bp) protein (417aa)
Diguanylate phosphodiesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPQ8_PARL1 rbh
diguanylate phosphodiesterase; K13593 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ABS61891.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_750_bf_scaffold_468_3
unknown

Not on your lists

comp(2137..2748)
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_4
unknown

Not on your lists

3106..3291
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_5
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3286..3960)
DNA (675bp) protein (225aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
DNA modification methylase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YEH5_THIV6
DNA modification methylase
SCNpilot_cont_750_bf_scaffold_468_6
unknown

Not on your lists

4198..4539
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_7
unknown

Not on your lists

4722..5411
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5520..5717
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JR91_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL07405.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_750_bf_scaffold_468_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5747..6181
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNW1_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU45957.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_468_10
unknown

Not on your lists

6187..6456
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_11
unknown

Not on your lists

comp(6527..6679)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6758..9247)
DNA (2490bp) protein (830aa)
Hemolysin expression modulating protein {ECO:0000313|EMBL:KJB93650.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PDK repeat-containing protein
SCNpilot_cont_750_bf_scaffold_468_13
unknown

Not on your lists

comp(9261..9533)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_14
unknown

Not on your lists

comp(9766..10185)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_15
unknown

Not on your lists

comp(10341..10514)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_16
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(10511..10993)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NST0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KKW05425.1}; TaxID=1618342 species="Bacteria; candidate division CPR1.;" source="candidate division CPR1 bacterium GW2011_GWC1_49_13.;"
SCNpilot_cont_750_bf_scaffold_468_17
unknown

Not on your lists

comp(11005..11319)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_18
unknown

Not on your lists

comp(12315..12758)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12758..13648)
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH46964.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
SCNpilot_cont_750_bf_scaffold_468_20

Not on your lists

comp(13650..14318)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037C4BB4
Uncharacterized protein {ECO:0000313|EMBL:KKN60030.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_750_bf_scaffold_468_21
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14385..14921)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IVH8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGP03448.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
SCNpilot_cont_750_bf_scaffold_468_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14918..19066)
DNA (4149bp) protein (1383aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q7S8_RHOPT
Tail protein {ECO:0000313|EMBL:ETR79332.1}; Flags: Fragment;; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_468_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19066..19476)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK07_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71728.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_468_24
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19476..20159)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Brucella sp. BO2 RepID=E2PJN2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDH86851.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_468_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20159..20800)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIS7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17062.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_468_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20803..23982)
DNA (3180bp) protein (1060aa)
Phage-related minor tail protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B6P4_9RHIZ
Prophage tail length tape measure protein {ECO:0000313|EMBL:CEG09720.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phage-related minor tail protein
SCNpilot_cont_750_bf_scaffold_468_27
unknown

Not on your lists

comp(23995..24144)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_468_28
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24249..24731)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRN9_METNO
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49510.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_468_29
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24738..26018)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W6S3_9CAUL rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDX79849.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_468_30
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26043..26750)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P2N8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ82391.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
Displaying items 1-30 of 81 in total

View Taxonomy