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SCNpilot_cont_750_bf_scaffold_507

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_507_1

Not on your lists

comp(1..225)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003782F63
Marine sediment metagenome DNA, contig: S03H2_L00380 {ECO:0000313|EMBL:GAH36454.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
major facilitator superfamily MFS_1
SCNpilot_cont_750_bf_scaffold_507_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(589..1503)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003050007 rbh
Monoamine oxidase {ECO:0000313|EMBL:ERF82965.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
LysR family regulatory protein rbh
SCNpilot_cont_750_bf_scaffold_507_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1979..2875)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSY3_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX82812.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_507_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3144..3878
DNA (735bp) protein (245aa)
oxidoreductase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D8E6E rbh
dehydrogenase rbh
Dehydrogenase protein {ECO:0000313|EMBL:ACM25178.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_750_bf_scaffold_507_5
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4003..4743
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. H160 RepID=B5WKA9_9BURK rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEA01164.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_750_bf_scaffold_507_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..5484
DNA (639bp) protein (213aa)
Putative dinucleotide-binding enzyme n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BGM2_RHILV rbh
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:CCE07009.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein; K06988 rbh
SCNpilot_cont_750_bf_scaffold_507_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5905..6606
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI54_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38048.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_507_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6660..7100)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N600_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE28260.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_750_bf_scaffold_507_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7116..7328
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PAT9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38666.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_507_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7375..8229)
DNA (855bp) protein (285aa)
hbdA2; 3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D54075
Uncharacterized protein {ECO:0000313|EMBL:EKS38667.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_bf_scaffold_507_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8433..8879
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI25_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30017.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_507_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8997..9899
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXE4_METNO
Multidrug DMT transporter permease {ECO:0000313|EMBL:KIZ42876.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_507_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10026..11090)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMS4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39668.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_507_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11184..12356)
DNA (1173bp) protein (391aa)
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:CDP54144.1}; EC=1.14.13.2 {ECO:0000313|EMBL:CDP54144.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
4-hydroxybenzoate 3-monooxygenase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003819996
SCNpilot_cont_750_bf_scaffold_507_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12474..13337
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F69_MESSB
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDP54143.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
AraC family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_507_16
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13479..13685)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SWT2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59724.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_507_17
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13786..14466
DNA (681bp) protein (227aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABA04838.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABA04838.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSA3_NITWN
SCNpilot_cont_750_bf_scaffold_507_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14615..14899
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KS3_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07461.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_750_bf_scaffold_507_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15197..15481
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215M8_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87908.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_507_20
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15644..16258)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAL9_9BRAD
Acetyltransferase {ECO:0000313|EMBL:KJC35351.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
N-acetyltransferase GCN5
SCNpilot_cont_750_bf_scaffold_507_21
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16431..16829)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z905_9BRAD
hypothetical protein
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KJC59731.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_bf_scaffold_507_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16916..18196)
DNA (1281bp) protein (427aa)
Acetylornithine deacetylase {ECO:0000313|EMBL:KIZ42733.1}; EC=3.5.1.16 {ECO:0000313|EMBL:KIZ42733.1};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX49_RHOP2
SCNpilot_cont_750_bf_scaffold_507_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18372..18635
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87903.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_507_24
unknown

Not on your lists

18893..19024
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_507_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19028..19249)
DNA (222bp) protein (74aa)
CreA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ5_NITHX
CreA; K05805 CreA protein
CreA {ECO:0000313|EMBL:ABE62902.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_507_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19871..21109
DNA (1239bp) protein (413aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N9_RHOPB rbh
hypothetical protein rbh
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABD87897.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_507_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21240..22163
DNA (924bp) protein (308aa)
Polysaccharide deacetylase n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9P7_RHOPT rbh
polysaccharide deacetylase rbh
Possible polysaccharide deacetylase {ECO:0000313|EMBL:CAE28480.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_750_bf_scaffold_507_28
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22200..22751
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TP94_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE08282.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_507_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22776..23243)
DNA (468bp) protein (156aa)
DoxX n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135R7_RHOPS
DoxX
DoxX {ECO:0000313|EMBL:ABE40172.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_507_30
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23601..25952)
DNA (2352bp) protein (784aa)
Malic enzyme {ECO:0000313|EMBL:KJC35337.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KJC35337.1};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
dme; NAD-dependent malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] rbh
NAD-dependent malic enzyme n=2 Tax=Bradyrhizobiaceae RepID=F7QM61_9BRAD rbh
Displaying items 1-30 of 63 in total

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