name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_507_1 |
Not on your lists |
comp(1..225)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003782F63
Marine sediment metagenome DNA, contig: S03H2_L00380 {ECO:0000313|EMBL:GAH36454.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
major facilitator superfamily MFS_1
|
|
SCNpilot_cont_750_bf_scaffold_507_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(589..1503)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003050007
rbh
Monoamine oxidase {ECO:0000313|EMBL:ERF82965.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
LysR family regulatory protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_507_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1979..2875)
|
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSY3_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX82812.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_750_bf_scaffold_507_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3144..3878
|
oxidoreductase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D8E6E
rbh
dehydrogenase
rbh
Dehydrogenase protein {ECO:0000313|EMBL:ACM25178.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_5
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4003..4743
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. H160 RepID=B5WKA9_9BURK
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEA01164.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_cont_750_bf_scaffold_507_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4846..5484
|
Putative dinucleotide-binding enzyme n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BGM2_RHILV
rbh
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:CCE07009.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein; K06988
rbh
|
|
SCNpilot_cont_750_bf_scaffold_507_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5905..6606
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI54_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38048.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_507_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6660..7100)
|
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N600_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE28260.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7116..7328
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PAT9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38666.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_507_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7375..8229)
|
hbdA2; 3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D54075
Uncharacterized protein {ECO:0000313|EMBL:EKS38667.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_cont_750_bf_scaffold_507_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8433..8879
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI25_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30017.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_507_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8997..9899
|
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXE4_METNO
Multidrug DMT transporter permease {ECO:0000313|EMBL:KIZ42876.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_507_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10026..11090)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMS4_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39668.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_507_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11184..12356)
|
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:CDP54144.1}; EC=1.14.13.2 {ECO:0000313|EMBL:CDP54144.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
4-hydroxybenzoate 3-monooxygenase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003819996
|
|
SCNpilot_cont_750_bf_scaffold_507_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12474..13337
|
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F69_MESSB
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDP54143.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
AraC family transcriptional regulator
|
|
SCNpilot_cont_750_bf_scaffold_507_16
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13479..13685)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SWT2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59724.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_507_17
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13786..14466
|
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABA04838.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABA04838.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSA3_NITWN
|
|
SCNpilot_cont_750_bf_scaffold_507_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14615..14899
|
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KS3_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07461.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15197..15481
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215M8_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87908.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_20
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15644..16258)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAL9_9BRAD
Acetyltransferase {ECO:0000313|EMBL:KJC35351.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
N-acetyltransferase GCN5
|
|
SCNpilot_cont_750_bf_scaffold_507_21
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16431..16829)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z905_9BRAD
hypothetical protein
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KJC59731.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
|
|
SCNpilot_cont_750_bf_scaffold_507_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16916..18196)
|
Acetylornithine deacetylase {ECO:0000313|EMBL:KIZ42733.1}; EC=3.5.1.16 {ECO:0000313|EMBL:KIZ42733.1};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX49_RHOP2
|
|
SCNpilot_cont_750_bf_scaffold_507_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18372..18635
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87903.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_24
unknown
|
Not on your lists |
18893..19024
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_507_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19028..19249)
|
CreA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ5_NITHX
CreA; K05805 CreA protein
CreA {ECO:0000313|EMBL:ABE62902.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19871..21109
|
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N9_RHOPB
rbh
hypothetical protein
rbh
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABD87897.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21240..22163
|
Polysaccharide deacetylase n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9P7_RHOPT
rbh
polysaccharide deacetylase
rbh
Possible polysaccharide deacetylase {ECO:0000313|EMBL:CAE28480.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_28
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22200..22751
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TP94_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE08282.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_507_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22776..23243)
|
DoxX n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135R7_RHOPS
DoxX
DoxX {ECO:0000313|EMBL:ABE40172.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_750_bf_scaffold_507_30
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23601..25952)
|
Malic enzyme {ECO:0000313|EMBL:KJC35337.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KJC35337.1};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
dme; NAD-dependent malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
rbh
NAD-dependent malic enzyme n=2 Tax=Bradyrhizobiaceae RepID=F7QM61_9BRAD
rbh
|