name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_538_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
732..1991
|
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039CBCC7
rbh
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA79381.2}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
hypothetical protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_538_2
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1991..2509
|
Phage prohead protease, HK97 family n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QHP1_DESB2
phage prohead protease, HK97 family; K06904
Phage prohead protease, HK97 family {ECO:0000313|EMBL:ADK85084.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_3
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2509..3030
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLF2_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KEP68027.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_538_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3031..4086
|
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B55950
rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ33073.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_538_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4072..5202)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM56_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF85888.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
phage integrase
|
|
SCNpilot_cont_750_bf_scaffold_538_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5726..6661
|
Rare lipoprotein A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLT6_NITHX
rare lipoprotein A; K03642 rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ABE62811.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6688..7614)
|
NAD(P) transhydrogenase subunit beta n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7R7_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48331.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ephA; epoxide hydrolase
|
|
SCNpilot_cont_750_bf_scaffold_538_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7799..9046
|
penicillin binding protein; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNF5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39888.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_cont_750_bf_scaffold_538_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9046..9738
|
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase {ECO:0000255|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000255|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000255|HAMAP-Rule:MF_00165}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
Thymidylate kinase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=KTHY_BRADU
|
|
SCNpilot_cont_750_bf_scaffold_538_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9735..10772
|
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ABD88253.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABD88253.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
DNA polymerase III, delta prime subunit n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214D3_RHOPB
rbh
|
|
SCNpilot_cont_750_bf_scaffold_538_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10827..12395
|
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Methionine--tRNA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214D2_RHOPB
|
|
SCNpilot_cont_750_bf_scaffold_538_12
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12410..13201
|
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
LuxR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003632CFE
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC35634.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
|
|
SCNpilot_cont_750_bf_scaffold_538_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13198..14001
|
PhnP n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374C966
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48327.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K06167 PhnP protein
|
|
SCNpilot_cont_750_bf_scaffold_538_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14040..15689)
|
medium-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Putative AMP-binding enzyme n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMZ9_9BRAD
Putative AMP-binding enzyme {ECO:0000313|EMBL:EGP07502.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_cont_750_bf_scaffold_538_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15801..17684)
|
Putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8B2_9BRAD
ABC transporter permease {ECO:0000313|EMBL:KIZ41731.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains
|
|
SCNpilot_cont_750_bf_scaffold_538_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17710..18822)
|
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136N8_RHOPS
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABE39951.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19136..20221)
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQM5_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP06502.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_538_18
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20471..22369)
|
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037EF62F
rbh
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57450.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_19
unknown
|
Not on your lists |
22655..22756
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_538_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22759..23187)
|
Putative lactoylglutathione lyase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N6Z4_RHOPA
lactoylglutathione lyase
Putative lactoylglutathione lyase {ECO:0000313|EMBL:CAE27910.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23184..23582)
|
FeS assembly SUF system protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QH66_RHOPT
FeS assembly SUF system protein
FeS assembly SUF system protein {ECO:0000313|EMBL:ACF01255.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23579..24826)
|
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ75_9BRAD
|
|
SCNpilot_cont_750_bf_scaffold_538_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24823..26148)
|
FeS assembly protein SufD n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ76_9BRAD
rbh
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
rbh
FeS assembly protein SufD {ECO:0000313|EMBL:EAQ34714.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
|
|
SCNpilot_cont_750_bf_scaffold_538_24
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26157..26912)
|
FeS assembly ATPase SufC (EC:3.6.3.30); K09013 Fe-S cluster assembly ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:ABA04924.1}; EC=3.6.3.30 {ECO:0000313|EMBL:ABA04924.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
FeS assembly ATPase SufC n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SS17_NITWN
|
|
SCNpilot_cont_750_bf_scaffold_538_25
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27032..28552)
|
cysteine desulfarase n=1 Tax=Afipia birgiae RepID=UPI0002F9F96D
Cysteine desulfurase {ECO:0000313|EMBL:KJC55776.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
|
|
SCNpilot_cont_750_bf_scaffold_538_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28644..29813)
|
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PKM6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40080.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_cont_750_bf_scaffold_538_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30156..30803
|
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MC7_RHOP5
hypothetical protein; K07018
Uncharacterized protein {ECO:0000313|EMBL:ABJ06907.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
|
|
SCNpilot_cont_750_bf_scaffold_538_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30947..32050)
|
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Anhydro-N-acetylmuramic acid kinase n=2 Tax=Rhodopseudomonas palustris RepID=ANMK_RHOP2
|
|
SCNpilot_cont_750_bf_scaffold_538_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32214..33467
|
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Tyrosine--tRNA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213P3_RHOPB
rbh
|
|
SCNpilot_cont_750_bf_scaffold_538_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33602..34798
|
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QH57_RHOPT
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACF01246.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
|