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SCNpilot_cont_750_bf_scaffold_559

Search features with annotation key words

Displaying items 31-60 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_559_31
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22602..22880)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZQ15020.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_559_32
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23056..23529
DNA (474bp) protein (158aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6G3_PARDP
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EXL07938.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_750_bf_scaffold_559_33
bacterium YEK0313, Bacteria

Not on your lists

23898..24227
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AS24_BURM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ16004.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_559_34
unknown

Not on your lists

24486..24632
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_559_35
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24951..25595)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSA9_HYPDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ22368.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_750_bf_scaffold_559_36
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26101..27456
DNA (1356bp) protein (452aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hemN; oxygen-independent coproporphyrinogen-III oxidase HemN (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
coproporphyrinogen III oxidase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B77195 rbh
SCNpilot_cont_750_bf_scaffold_559_37
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27729..28448
DNA (720bp) protein (240aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7L9_STAND
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADH88467.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_559_38
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28506..29072)
DNA (567bp) protein (189aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
bsdB; phenolic acid decarboxylase subunit B (EC:4.1.1.- 4.1.1.61)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003674FA5
SCNpilot_cont_750_bf_scaffold_559_39

Not on your lists

comp(29069..30598)
DNA (1530bp) protein (510aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCN4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO04701.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
3-octaprenyl-4-hydroxybenzoate decarboxylase rbh
SCNpilot_cont_750_bf_scaffold_559_40
unknown

Not on your lists

30746..31009
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_559_41
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31122..32396
DNA (1275bp) protein (425aa)
Major facilitator superfamily MFS_1 n=2 Tax=Sphingopyxis RepID=Q1GWZ6_SPHAL rbh
MFS transporter {ECO:0000313|EMBL:EXL02113.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
major facilitator superfamily transporter rbh
SCNpilot_cont_750_bf_scaffold_559_42
unknown

Not on your lists

32596..32901
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_559_43
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33355..34194
DNA (840bp) protein (280aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE66_9GAMM
SCNpilot_cont_750_bf_scaffold_559_44
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34244..34756
DNA (513bp) protein (171aa)
Succinate dehydrogenase, cytochrome b subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE65_9GAMM
Succinate dehydrogenase, cytochrome b subunit {ECO:0000313|EMBL:EIL97756.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinate dehydrogenase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_cont_750_bf_scaffold_559_45
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34759..35145
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036E18D1
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EKE71540.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein
SCNpilot_cont_750_bf_scaffold_559_46
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35201..35641
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTQ5_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC21019.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_750_bf_scaffold_559_47
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36298..38799
DNA (2502bp) protein (834aa)
nitrate reductase subunit alpha protein; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase Z subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWI6_9PROT
Nitrate reductase Z subunit alpha {ECO:0000313|EMBL:EKE78977.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_750_bf_scaffold_559_48
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38738..39961
DNA (1224bp) protein (408aa)
narG; nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase Z subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWI6_9PROT
Nitrate reductase Z subunit alpha {ECO:0000313|EMBL:EKE78977.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_750_bf_scaffold_559_49
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39958..41484
DNA (1527bp) protein (509aa)
Nitrate reductase 1, beta (Fe-S) subunit {ECO:0000313|EMBL:CDX53658.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CDX53658.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nitrate reductase subunit beta; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4] rbh
Nitrate reductase, beta subunit n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUF1_HYPDA rbh
SCNpilot_cont_750_bf_scaffold_559_50
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41484..42170
DNA (687bp) protein (229aa)
nitrate reductase molybdenum cofactor assembly chaperone (EC:1.7.99.4); K00373 nitrate reductase 1, delta subunit
Nitrate reductase molybdenum cofactor assembly chaperone NarJ n=1 Tax=Oceanibaculum indicum P24 RepID=K2KN61_9PROT
Nitrate reductase molybdenum cofactor assembly chaperone NarJ {ECO:0000313|EMBL:EKE78975.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_750_bf_scaffold_559_51
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42189..42959
DNA (771bp) protein (257aa)
narI; nitrate reductase subunit gamma (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Respiratory nitrate reductase subunit gamma n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7U6_9PROT
Respiratory nitrate reductase subunit gamma {ECO:0000313|EMBL:EKE78974.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_750_bf_scaffold_559_52
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42963..43859
DNA (897bp) protein (299aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
peptidyl-prolyl cis-trans isomerase domain-containing protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase ppiD n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHZ4_9RHIZ rbh
SCNpilot_cont_750_bf_scaffold_559_53
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43867..44166
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWI2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78972.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_559_54
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44181..44750
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9K1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56770.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_bf_scaffold_559_55
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44756..45277
DNA (522bp) protein (174aa)
mogA; molybdenum cofactor biosynthesis protein MogA; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
Molybdenum cofactor biosynthesis protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWV5_AZOC5
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:BAF87429.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_559_56
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45301..45675)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B898_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56771.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_bf_scaffold_559_57
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45823..47247)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3I1_9RHIZ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK56772.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_bf_scaffold_559_58
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47247..48095)
DNA (849bp) protein (283aa)
Iron permease FTR1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MW2_MESSB rbh
iron permease FTR1; K07243 high-affinity iron transporter rbh
Iron permease FTR1 {ECO:0000313|EMBL:ABG61257.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_559_59
unknown

Not on your lists

48143..48463
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_559_60
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48460..49005)
DNA (546bp) protein (182aa)
Ferrous iron transporter n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AZZ5_9RHIZ
Ferrous iron transporter
Ferrous iron transporter {ECO:0000313|EMBL:AGK56774.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying items 31-60 of 102 in total

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