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SCNpilot_cont_750_bf_scaffold_562

Search features with annotation key words

Displaying items 31-60 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_562_31
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30166..32073)
DNA (1908bp) protein (636aa)
peptidase M3B, oligoendopeptidase-related clade 3; K08602 oligoendopeptidase F [EC:3.4.24.-]
Peptidase M3B, oligoendopeptidase-related clade 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNZ4_NITHX
Peptidase M3B, oligoendopeptidase-related clade 3 {ECO:0000313|EMBL:ABE62053.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_562_32
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32247..33737
DNA (1491bp) protein (497aa)
Fis family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036553B1 rbh
two component, sigma54 specific, Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABE62052.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_562_33
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34198..36318
DNA (2121bp) protein (707aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YQX4_9BRAD rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHR05512.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
peptidoglycan binding domain-containing protein
SCNpilot_cont_750_bf_scaffold_562_34
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36575..38227
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNZ7_NITHX
ATP-binding protein {ECO:0000313|EMBL:KJC38547.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_35
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38777..39076)
DNA (300bp) protein (100aa)
alkaline phosphatase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EAEE3E
Bradyrhizobium elkanii strain UASWS1015 Contig160, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52221.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K09948 hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_36
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39256..39810
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002FD45DE
Membrane protein {ECO:0000313|EMBL:KJC43736.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_37
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39807..41243
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXX7_9BRAD
SCNpilot_cont_750_bf_scaffold_562_38
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41479..42687
DNA (1209bp) protein (403aa)
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein {ECO:0000313|EMBL:ABE64124.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ABE64124.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI23_NITHX
twin-arginine translocation pathway signal
SCNpilot_cont_750_bf_scaffold_562_39
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42699..43019
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031B8778
cytochrome c oxidoreductase subunit B
Sulfite:cytochrome C oxidoreductase subunit B {ECO:0000313|EMBL:KJC58676.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_bf_scaffold_562_40
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43201..43626)
DNA (426bp) protein (142aa)
OsmC-like protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13BA1_RHOPS
OsmC-like protein; K04063 osmotically inducible protein OsmC
OsmC-like protein {ECO:0000313|EMBL:ABE38638.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_562_41
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43767..46142)
DNA (2376bp) protein (792aa)
Aliphatic nitrilase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGB7_9BRAD
Aliphatic nitrilase {ECO:0000313|EMBL:ERF81529.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_42
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46300..46977)
DNA (678bp) protein (226aa)
TPR repeat protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J081_RHOP2
TPR repeat-containing protein
TPR repeat protein {ECO:0000313|EMBL:ABD06129.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_562_43
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47121..47246)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=11 Tax=Bradyrhizobium RepID=RL36_BRADU
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_cont_750_bf_scaffold_562_44
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47542..48411
DNA (870bp) protein (290aa)
amidohydrolase n=1 Tax=Afipia birgiae RepID=UPI000366DF8A
Amidohydrolase {ECO:0000313|EMBL:KIZ46842.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein; K07045 rbh
SCNpilot_cont_750_bf_scaffold_562_45
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48537..49274
DNA (738bp) protein (246aa)
2-haloalkanoic acid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2]
haloacid dehalogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037E3261
Haloacid dehalogenase {ECO:0000313|EMBL:KJC44850.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_750_bf_scaffold_562_46
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49320..49787
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PA92_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35243.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_47
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49793..52111)
DNA (2319bp) protein (773aa)
Putative outer membrane receptor for iron transport n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBR3_RHOPA rbh
outer membrane receptor for iron transport rbh
Putative outer membrane receptor for iron transport {ECO:0000313|EMBL:CAE26209.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_750_bf_scaffold_562_48
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52241..52621)
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JE25_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06231.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_562_49
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53243..54184)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V379_9BRAD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI52409.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_750_bf_scaffold_562_50
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54339..55037
DNA (699bp) protein (233aa)
Pirin domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V380_9BRAD
Pirin domain protein {ECO:0000313|EMBL:EFI52410.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
pirin family protein; K06911
SCNpilot_cont_750_bf_scaffold_562_51
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55187..55786
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
NAD(P)H dehydrogenase (quinone) n=2 Tax=Bradyrhizobiaceae RepID=F7QG34_9BRAD rbh
wrbA; flavoprotein WrbA; K03809 Trp repressor binding protein rbh
SCNpilot_cont_750_bf_scaffold_562_52
unknown

Not on your lists

55926..56048
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_562_53
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56161..56391)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG37_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09979.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_54
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56552..56923
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBS4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37070.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_55
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57015..58535)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFT0_9BRAD
Permease {ECO:0000313|EMBL:KIZ42990.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
conserved membrane hypothetical protein
SCNpilot_cont_750_bf_scaffold_562_56
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58532..59302)
DNA (771bp) protein (257aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEK3_9BRAD rbh
ABC transporter {ECO:0000313|EMBL:KJC57679.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_562_57
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59486..61021
DNA (1536bp) protein (512aa)
carboxypeptidase-related protein (EC:3.4.16.-) rbh
carboxypeptidase n=1 Tax=Rhizobium leguminosarum RepID=UPI000380B39F
Carboxypeptidase {ECO:0000313|EMBL:AHF86594.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_cont_750_bf_scaffold_562_58
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61032..62570)
DNA (1539bp) protein (513aa)
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent {ECO:0000313|EMBL:KFC75085.1}; EC=1.2.1.3 {ECO:0000313|EMBL:KFC75085.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC:1.2.1.8); K00151 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TWE5_9BRAD
SCNpilot_cont_750_bf_scaffold_562_59
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62719..65439)
DNA (2721bp) protein (907aa)
ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
ATP dependent DNA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210G6_RHOPB rbh
ATP dependent DNA ligase {ECO:0000313|EMBL:ABD89220.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_562_60
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65825..66124)
DNA (300bp) protein (100aa)
Histone family protein DNA-binding protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JB3_RHOP5
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ABJ07971.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Displaying items 31-60 of 101 in total

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