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SCNpilot_cont_750_bf_scaffold_566

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_566_1
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256..1140
DNA (885bp) protein (295aa)
Probable amino-acid ABC transporter periplasmic-binding protein y4tE n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Y4TE_RHISN rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDB01637.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
amino acid ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_566_2
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1279..1950
DNA (672bp) protein (224aa)
Amino-acid ABC transporter permease y4tF n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW63_PUSST
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
Amino-acid ABC transporter permease y4tF {ECO:0000313|EMBL:AEC20077.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_750_bf_scaffold_566_3
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1954..2649
DNA (696bp) protein (232aa)
Probable amino-acid ABC transporter permease protein y4tG n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Y4TG_RHISN rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KDB01639.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_566_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2646..3419
DNA (774bp) protein (258aa)
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA 1 n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SR38_RHIET
ehuA-1; ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA 1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA 1 {ECO:0000313|EMBL:AGS24497.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_750_bf_scaffold_566_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3478..4077
DNA (600bp) protein (200aa)
Leucine-responsive regulatory protein, regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Y5_PELHB
leucine-responsive regulatory protein; K15782 Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Leucine-responsive regulatory protein, regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system {ECO:0000313|EMBL:AEQ50280.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_750_bf_scaffold_566_6
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4205..5704
DNA (1500bp) protein (500aa)
succinate-semialdehyde dehydrogenase; K15786 aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] rbh
Succinate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Y9_PELHB rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEQ50284.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_750_bf_scaffold_566_7
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5736..7106
DNA (1371bp) protein (457aa)
hypothetical protein; K15785 L-2,4-diaminobutyrate transaminase [EC:2.6.1.-]
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MQP4_9RHIZ rbh
Aminotransferase {ECO:0000313|EMBL:KDB03872.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
SCNpilot_cont_750_bf_scaffold_566_8
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7335..8093
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037AA76F rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KHJ56433.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
regulatory protein GntR HTH
SCNpilot_cont_750_bf_scaffold_566_9
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8161..9144
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C38E0 rbh
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHJ56432.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ribose ABC transporter substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_566_10
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..11160
DNA (1902bp) protein (634aa)
putative ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003654512 rbh
ABC transporter {ECO:0000313|EMBL:KHJ56431.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
SCNpilot_cont_750_bf_scaffold_566_11
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11250..12152
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368E004 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KHJ56430.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ABC transporter permease; K10440 ribose transport system permease protein
SCNpilot_cont_750_bf_scaffold_566_12
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12149..14020
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BF1C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHJ56429.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_566_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14043..15032
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381886A rbh
NAD-dependent epimerase {ECO:0000313|EMBL:KJB94528.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Nucleoside-diphosphate-sugar epimerase rbh
SCNpilot_cont_750_bf_scaffold_566_14
bacterium YEK0313, Bacteria

Not on your lists

15035..16291
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFC7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CEJ15103.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Hrp-dependent type III effector protein rbh
SCNpilot_cont_750_bf_scaffold_566_15
bacterium YEK0313, Bacteria

Not on your lists

16300..16935
DNA (636bp) protein (212aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
Putative class II aldolase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIN1_9RHIZ
L-fuculose phosphate aldolase {ECO:0000313|EMBL:CEJ15104.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_566_16
bacterium YEK0313, Bacteria

Not on your lists

16932..17711
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMC7_9RHIZ rbh
SCNpilot_cont_750_bf_scaffold_566_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17766..19022
DNA (1257bp) protein (419aa)
ATP-binding region ATPase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX0_MESCW
ATPase domain-containing protein
ATPase {ECO:0000313|EMBL:ESZ26190.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_750_bf_scaffold_566_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19022..19765
DNA (744bp) protein (248aa)
Response regulator receiver n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6W5_9RHIZ
Response regulator receiver {ECO:0000313|EMBL:CDX25663.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
response regulator receiver
SCNpilot_cont_750_bf_scaffold_566_19
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19882..20073
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6W6_9RHIZ
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:EHH12526.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
uncharacterized protein, 4-oxalocrotonate tautomerase
SCNpilot_cont_750_bf_scaffold_566_20
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20079..20963
DNA (885bp) protein (295aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase {ECO:0000313|EMBL:ADV10230.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ADV10230.1};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Gluconolactonase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX3_MESCW
SCNpilot_cont_750_bf_scaffold_566_21
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21093..22106
DNA (1014bp) protein (338aa)
UPI0003CE6910 related cluster n=1 Tax=unknown RepID=UPI0003CE6910
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW82084.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
D-ribose substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_566_22
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22155..23624
DNA (1470bp) protein (490aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
UPI0003CE560D related cluster n=1 Tax=unknown RepID=UPI0003CE560D rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY18412.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
SCNpilot_cont_750_bf_scaffold_566_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23626..24603
DNA (978bp) protein (326aa)
UPI0003CFCC25 related cluster n=1 Tax=unknown RepID=UPI0003CFCC25
Putative ribose ABC transporter, permease {ECO:0000313|EMBL:CDX30676.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
SCNpilot_cont_750_bf_scaffold_566_24
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24604..25551
DNA (948bp) protein (316aa)
Putative ribose ABC transporter, permease n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK84_9RHIZ rbh
Putative ribose ABC transporter, permease {ECO:0000313|EMBL:CCV04528.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_566_25
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25566..25919)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E7F42
Uncharacterized protein {ECO:0000313|EMBL:BAQ17797.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_566_26
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26006..28234)
DNA (2229bp) protein (743aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase {ECO:0000313|EMBL:AGT11165.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AGT11165.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Adenylate cyclase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y696_PARAH
SCNpilot_cont_750_bf_scaffold_566_27
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28367..29218)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRF1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57607.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_566_28
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29221..30672)
DNA (1452bp) protein (484aa)
Tetratricopeptide TPR_2 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P9M6_9RHIZ
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:EKF57608.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_566_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30916..31245)
DNA (330bp) protein (110aa)
Anti-anti-sigma factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFR6_9RHIZ
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
btrV; anti-sigma factor antagonist btrV
SCNpilot_cont_750_bf_scaffold_566_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31387..32436
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000372A1D3
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:EYR83986.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
anti-sigma regulatory factor, serine/threonine protein kinase
Displaying items 1-30 of 46 in total

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