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SCNpilot_cont_750_bf_scaffold_720

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_720_1
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63..398
DNA (336bp) protein (112aa)
nucleotidyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B6A2E6
Nucleotidyltransferase HEPN domain-containing protein {ECO:0000313|EMBL:AJD42397.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
nucleotidyltransferase
SCNpilot_cont_750_bf_scaffold_720_2
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1083..1955)
DNA (873bp) protein (291aa)
Putative phenol degradation enzyme n=1 Tax=Celeribacter baekdonensis B30 RepID=K2K0X8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEZ05706.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
putative phenol degradation enzyme
SCNpilot_cont_750_bf_scaffold_720_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2055..2828)
DNA (774bp) protein (258aa)
Putative levodione reductase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8U5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47941.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative levodione reductase
SCNpilot_cont_750_bf_scaffold_720_4
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2821..4017)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
Thiolase, N-terminal domain protein n=2 Tax=delta proteobacterium NaphS2 RepID=D8EYP6_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS39134.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCNpilot_cont_750_bf_scaffold_720_5
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4014..4460)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS39135.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCNpilot_cont_750_bf_scaffold_720_6
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4457..6016)
DNA (1560bp) protein (520aa)
AMP-binding enzyme n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYP4_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS39137.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
ligase rbh
SCNpilot_cont_750_bf_scaffold_720_7
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6041..8095)
DNA (2055bp) protein (685aa)
Hydantoinase B/oxoprolinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYP3_9DELT rbh
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:EFK11360.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hydantoinase B/oxoprolinase rbh
SCNpilot_cont_750_bf_scaffold_720_8
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8149..10281)
DNA (2133bp) protein (711aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14]
Hydantoinase/oxoprolinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYP2_9DELT rbh
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
SCNpilot_cont_750_bf_scaffold_720_9
unknown

Not on your lists

comp(10309..11115)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_720_10
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..11456)
DNA (345bp) protein (115aa)
Acetone carboxylase gamma subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0D0_9DELT
Acetone carboxylase gamma subunit {ECO:0000313|EMBL:EFK10777.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
acetone carboxylase gamma subunit
SCNpilot_cont_750_bf_scaffold_720_11
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11453..13432)
DNA (1980bp) protein (660aa)
apc1; subunit of acetophenone carboxylase; K10701 acetophenone carboxylase [EC:6.4.1.8]
Putative bacteriochlorophyll 4-vinyl reductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0D1_9DELT rbh
Putative bacteriochlorophyll 4-vinyl reductase {ECO:0000313|EMBL:EFK10714.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
SCNpilot_cont_750_bf_scaffold_720_12
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13503..14114)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0D2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJS40804.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_720_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14466..15821)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Brucella abortus RepID=N7UX78_BRUAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79285.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cytosine/purines, uracil, thiamine, allantoin transporter permease rbh
SCNpilot_cont_750_bf_scaffold_720_14
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15876..17957)
DNA (2082bp) protein (694aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase n=6 Tax=Brucella RepID=C9U1J0_BRUPB rbh
5-oxoprolinase {ECO:0000313|EMBL:EEY24694.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
SCNpilot_cont_750_bf_scaffold_720_15
Brucella ceti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17970..19730)
DNA (1761bp) protein (587aa)
hydantoinase B/oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
Uncharacterized protein n=4 Tax=Brucella RepID=N7QNF3_9RHIZ rbh
Hydantoinase B/oxoprolinase family protein {ECO:0000313|EMBL:EEH13885.1}; TaxID=595497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella ceti str. Cudo.;"
SCNpilot_cont_750_bf_scaffold_720_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19973..20941
DNA (969bp) protein (323aa)
Transcriptional activator NphR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ7_9RHIZ rbh
Transcriptional activator NphR {ECO:0000313|EMBL:EYR79282.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_720_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21248..22195)
DNA (948bp) protein (316aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BDP8_RHILV
Transcriptional regulator {ECO:0000313|EMBL:EJC64055.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_720_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22348..23529
DNA (1182bp) protein (394aa)
muconate and chloromuconate cycloisomerase; K01856 muconate cycloisomerase [EC:5.5.1.1]
Muconate/chloromuconate cycloisomerase n=2 Tax=Rhizobium leguminosarum RepID=J0USQ8_RHILV
Muconate/chloromuconate cycloisomerase {ECO:0000313|EMBL:EJC64056.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_750_bf_scaffold_720_19
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23540..23830
DNA (291bp) protein (97aa)
Muconolactone Delta-isomerase {ECO:0000256|PIRNR:PIRNR001486}; Short=MIase {ECO:0000256|PIRNR:PIRNR001486};; EC=5.3.3.4 {ECO:0000256|PIRNR:PIRNR001486};; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein; K03464 muconolactone D-isomerase [EC:5.3.3.4]
Muconolactone Delta-isomerase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4D3_RHIFH
SCNpilot_cont_750_bf_scaffold_720_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23883..24821
DNA (939bp) protein (313aa)
catA; catechol 1,2-dioxygenase (EC:1.13.11.1)
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:AFL53968.1}; EC=1.13.11.1 {ECO:0000313|EMBL:AFL53968.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
catechol 1,2-dioxygenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E2E5F
SCNpilot_cont_750_bf_scaffold_720_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24927..26285
DNA (1359bp) protein (453aa)
Benzoate 1,2-dioxygenase alpha subunit; K05549 benzoate/toluate 1,2-dioxygenase alpha subunit [EC:1.14.12.10 1.14.12.-]
Benzoate 1,2-dioxygenase alpha subunit n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4D5_RHIFH
Benzene 1,2-dioxygenase {ECO:0000313|EMBL:KDP71773.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_cont_750_bf_scaffold_720_22
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26282..26770
DNA (489bp) protein (163aa)
2-chlorobenzoate 1,2-dioxygenase; K08686 2-chlorobenzoate 1,2-dioxygenase [EC:1.14.12.13]
2-chlorobenzoate 1,2-dioxygenase {ECO:0000313|EMBL:ABL69283.1}; EC=1.14.12.13 {ECO:0000313|EMBL:ABL69283.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
2-chlorobenzoate 1,2-dioxygenase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B189_PARDP
SCNpilot_cont_750_bf_scaffold_720_23
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26809..26979
DNA (171bp) protein (57aa)
Electron transfer component of benzoate 1,2-dioxygenase n=1 Tax=Burkholderia gladioli RepID=Q3C2D2_BURGA
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:KGC13297.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
benC; benzoate 1,2-dioxygenase electron transfer component; K05784 benzoate/toluate 1,2-dioxygenase electron transfer component
Displaying 23 items

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