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SCNpilot_cont_750_bf_scaffold_782

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_782_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent {ECO:0000313|EMBL:KFC75085.1}; EC=1.2.1.3 {ECO:0000313|EMBL:KFC75085.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; K00151 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
UPI0003CE37D3 related cluster n=1 Tax=unknown RepID=UPI0003CE37D3
SCNpilot_cont_750_bf_scaffold_782_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..2026)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F658B8
Uncharacterized protein {ECO:0000313|EMBL:KIZ40058.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
amidohydrolase family protein; K07047
SCNpilot_cont_750_bf_scaffold_782_3
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2016..2411)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000363CF7B
endoribonuclease
Putative endoribonuclease {ECO:0000313|EMBL:CAJ48873.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
SCNpilot_cont_750_bf_scaffold_782_4
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(2442..3194)
DNA (753bp) protein (251aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQL5_TRURR
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADI14999.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
SCNpilot_cont_750_bf_scaffold_782_5
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3178..4941)
DNA (1764bp) protein (588aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZZ28_DEIPD
branched-chain amino acid ABC transporter ATPase
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AFZ66459.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
SCNpilot_cont_750_bf_scaffold_782_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4941..5963)
DNA (1023bp) protein (341aa)
ABC transporter permease protein (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L310_BORA1
Uncharacterized protein {ECO:0000313|EMBL:KJC48786.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter permease
SCNpilot_cont_750_bf_scaffold_782_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5966..7147)
DNA (1182bp) protein (394aa)
ABC transporter, substrate-binding protein (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L309_BORA1
Uncharacterized protein {ECO:0000313|EMBL:KJC52766.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter substrate-binding protein
SCNpilot_cont_750_bf_scaffold_782_8
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7255..8262)
DNA (1008bp) protein (336aa)
catechol 2,3-dioxygenase (EC:1.13.11.2); K00446 catechol 2,3-dioxygenase [EC:1.13.11.2]
Putative catechol 2,3-dioxygenase (Metapyrocatechase) {ECO:0000313|EMBL:CAJ48875.1}; EC=1.13.11.2 {ECO:0000313|EMBL:CAJ48875.1};; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
Putative catechol 2,3-dioxygenase (Metapyrocatechase) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L314_BORA1
SCNpilot_cont_750_bf_scaffold_782_9
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8389..8802)
DNA (414bp) protein (138aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QEP6_9BRAD
Membrane protein {ECO:0000313|EMBL:KIF42786.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
RSp1315; hypothetical protein
SCNpilot_cont_750_bf_scaffold_782_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8823..10034)
DNA (1212bp) protein (404aa)
flavin-dependent monooxygenase oxygenase subunit n=1 Tax=Azoarcus toluclasticus RepID=UPI000373C9EA
Uncharacterized protein {ECO:0000313|EMBL:KJC56076.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
acyl-CoA dehydrogenase
SCNpilot_cont_750_bf_scaffold_782_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10171..10833
DNA (663bp) protein (221aa)
Crp-family transcriptional regulator (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L307_BORA1
Uncharacterized protein {ECO:0000313|EMBL:KJC52768.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Crp family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_782_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10843..11529)
DNA (687bp) protein (229aa)
NADH-FMN oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E137_9ACTN
Flavin oxidoreductase {ECO:0000313|EMBL:EZQ12730.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_782_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11596..12228)
DNA (633bp) protein (211aa)
Crp-family transcriptional regulator (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L307_BORA1
Uncharacterized protein {ECO:0000313|EMBL:KJC56075.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Crp family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_782_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12290..13216)
DNA (927bp) protein (309aa)
lipase n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558D37
lipase
Putative lipase {ECO:0000313|EMBL:CCN21519.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_cont_750_bf_scaffold_782_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13239..14909)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036D07CA
Metal-dependent hydrolase {ECO:0000313|EMBL:AIB15998.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
metallo-dependent hydrolase rbh
SCNpilot_cont_750_bf_scaffold_782_16
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14896..15942)
DNA (1047bp) protein (349aa)
Putative High-affinity branched-chain amino acid transport system permease protein BraE n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MMQ5_9ACTO
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
SCNpilot_cont_750_bf_scaffold_782_17
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15939..16820)
DNA (882bp) protein (294aa)
ABC transporter permease n=1 Tax=Nonomuraea coxensis RepID=UPI000376CDC9
Inner-membrane translocator {ECO:0000313|EMBL:EFL36764.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_782_18
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16817..17527)
DNA (711bp) protein (237aa)
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M353_9NOCA
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) {ECO:0000313|EMBL:CCW11249.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
putative branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_cont_750_bf_scaffold_782_19

Not on your lists

comp(17524..18288)
DNA (765bp) protein (255aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036F3BF9
ABC transporter {ECO:0000313|EMBL:KGA17067.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_782_20
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18285..19241)
DNA (957bp) protein (319aa)
amidase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037E045E
Amidase {ECO:0000313|EMBL:AIB15967.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_782_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19241..19927)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F112F1
hypothetical protein; K09967 hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_750_bf_scaffold_782_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19949..21217)
DNA (1269bp) protein (423aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAI7_RHOPT
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACF00524.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_bf_scaffold_782_23
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21358..21666)
DNA (309bp) protein (103aa)
extradiol ring-cleavage dioxygenase LigAB, LigA subunit; K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
Extradiol ring-cleavage dioxygenase LigAB, LigA subunit n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B537_STRRD
Extradiol ring-cleavage dioxygenase LigAB, LigA subunit {ECO:0000313|EMBL:ACZ87561.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_750_bf_scaffold_782_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21679..22554)
DNA (876bp) protein (292aa)
hypothetical protein; K04101 protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000365C547 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_750_bf_scaffold_782_25
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22689..23444
DNA (756bp) protein (252aa)
Transcriptional regulator, GntR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A134_STAND
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH87544.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_782_26
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24131..24496
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB09422.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
SCNpilot_cont_750_bf_scaffold_782_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24843..24974
DNA (132bp) protein (44aa)
CNT family concentrative nucleoside transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRB8_9BRAD
CNT family concentrative nucleoside transporter {ECO:0000313|EMBL:ERF80122.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_782_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25040..25774
DNA (735bp) protein (245aa)
CNT family concentrative nucleoside transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRB8_9BRAD
CNT family concentrative nucleoside transporter {ECO:0000313|EMBL:ERF80122.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein; K07045
SCNpilot_cont_750_bf_scaffold_782_29
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25771..26871
DNA (1101bp) protein (367aa)
hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E3B9C2 rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:ERF80123.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_782_30
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26929..27288
DNA (360bp) protein (120aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICP1_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF80124.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative ferredoxin
Displaying items 1-30 of 34 in total

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