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SCNpilot_cont_750_bf_scaffold_811

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_811_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
S-adenosylmethionine; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU5_9PROT
SCNpilot_cont_750_bf_scaffold_811_2
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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845..1168
DNA (324bp) protein (108aa)
Insertion element IS401 uncharacterized 12.4 kDa protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=YISX_BURM1
IS401 transposase
Insertion element IS401 uncharacterized 12.4 kDa protein; TaxID=395019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans (strain ATCC 17616 / 249).;"
SCNpilot_cont_750_bf_scaffold_811_3
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1318..1815
DNA (498bp) protein (166aa)
Integrase, catalytic region n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AEW2_NITEC
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABI59623.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
SCNpilot_cont_750_bf_scaffold_811_4
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2321..2848)
DNA (528bp) protein (176aa)
Transposase IS4 family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFX8_NITSI
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEJ02704.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_cont_750_bf_scaffold_811_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2924..4678
DNA (1755bp) protein (585aa)
Bilirubin oxidase (EC:1.3.3.5); K08100 bilirubin oxidase [EC:1.3.3.5] rbh
Bilirubin oxidase {ECO:0000313|EMBL:ABB74977.1}; EC=1.3.3.5 {ECO:0000313|EMBL:ABB74977.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Bilirubin oxidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E4_NITMU rbh
SCNpilot_cont_750_bf_scaffold_811_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4709..5602
DNA (894bp) protein (298aa)
Universal stress protein family 4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIH6_9PROT rbh
Universal stress protein family 4 {ECO:0000313|EMBL:KIO49196.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_811_7
unknown

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5875..6690
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_811_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7070..7435)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8H4_NITMU
transport-associated protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74947.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7592..10261)
DNA (2670bp) protein (890aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E7_NITMU rbh
GCN5-like N-acetyltransferase; K09181 hypothetical protein rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABB74974.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10305..10778)
DNA (474bp) protein (158aa)
HoxW protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E8_NITMU
HoxW protein
HoxW protein {ECO:0000313|EMBL:ABB74973.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10778..12262)
DNA (1485bp) protein (495aa)
NAD-reducing hydrogenase subunit HoxH {ECO:0000313|EMBL:CCU61211.1}; EC=1.12.1.2 {ECO:0000313|EMBL:CCU61211.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NAD-reducing hydrogenase subunit HoxH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF08_9PROT rbh
nickel-dependent hydrogenase, large subunit rbh
SCNpilot_cont_750_bf_scaffold_811_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12275..12832)
DNA (558bp) protein (186aa)
hydrogen dehydrogenase (EC:1.12.1.2); K00436 hydrogen dehydrogenase [EC:1.12.1.2] rbh
Hydrogen dehydrogenase {ECO:0000313|EMBL:ABB74970.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ABB74970.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Hydrogen dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F1_NITMU rbh
SCNpilot_cont_750_bf_scaffold_811_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12822..13547)
DNA (726bp) protein (242aa)
hydrogen dehydrogenase (EC:1.12.1.2); K00436 hydrogen dehydrogenase [EC:1.12.1.2] rbh
Hydrogen dehydrogenase {ECO:0000313|EMBL:ABB74969.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ABB74969.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Hydrogen dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F2_NITMU rbh
SCNpilot_cont_750_bf_scaffold_811_14
unknown

Not on your lists

13718..13975
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_811_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14005..15351)
DNA (1347bp) protein (449aa)
hydrogen dehydrogenase (EC:1.12.1.2); K00436 hydrogen dehydrogenase [EC:1.12.1.2] rbh
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit {ECO:0000313|EMBL:ABB74968.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ABB74968.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F3_NITMU rbh
SCNpilot_cont_750_bf_scaffold_811_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15357..16409)
DNA (1053bp) protein (351aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F4_NITMU rbh
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE rbh
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ABB74967.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16354..18642)
DNA (2289bp) protein (763aa)
[NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF09_9PROT rbh
[NiFe] hydrogenase metallocenter assembly protein HypF {ECO:0000313|EMBL:CCU61216.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF rbh
SCNpilot_cont_750_bf_scaffold_811_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18726..19880)
DNA (1155bp) protein (385aa)
Hydrogenase formation HypD protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F6_NITMU rbh
hydrogenase formation HypD protein; K04654 hydrogenase expression/formation protein HypD rbh
Hydrogenase formation HypD protein {ECO:0000313|EMBL:ABB74965.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19877..20671)
DNA (795bp) protein (265aa)
Hydrogenase accessory protein HypB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F7_NITMU rbh
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB rbh
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:ABB74964.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20690..21067)
DNA (378bp) protein (126aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=HYPA_NITMU
hydrogenase expression/synthesis, HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF
Probable hydrogenase nickel incorporation protein HypA {ECO:0000255|HAMAP-Rule:MF_00213}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21030..21266)
DNA (237bp) protein (79aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F9_NITMU
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC
Hydrogenase assembly chaperone hypC/hupF {ECO:0000313|EMBL:ABB74962.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21518..22645)
DNA (1128bp) protein (376aa)
Metal dependent phosphohydrolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8G0_NITMU rbh
metal dependent phosphohydrolase rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABB74961.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_811_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23133..23456
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IS02_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KIO48240.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter; K02066 putative ABC transport system permease protein
Displaying 23 items

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