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SCNpilot_cont_750_bf_scaffold_819

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_819_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)
Transposase orfA IS5 family element n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1T0_9BRAD
Transposase orfA IS5 family element {ECO:0000313|EMBL:EAQ33807.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
transposase
SCNpilot_cont_750_bf_scaffold_819_2
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(567..1568)
DNA (1002bp) protein (334aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I5K2_9BRAD
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJN15931.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
transcriptional regulatory protein AraC family
SCNpilot_cont_750_bf_scaffold_819_3
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1809..3383
DNA (1575bp) protein (525aa)
AMP-dependent, long-chain-fatty-acid-CoA ligase (EC:6.2.1.-); K01913 [EC:6.2.1.-] rbh
Putative AMP-dependent, long-chain-fatty-acid-CoA ligase n=2 Tax=Proteobacteria RepID=Q13VV5_BURXL rbh
Uncharacterized protein {ECO:0000313|EMBL:AIU93827.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
SCNpilot_cont_750_bf_scaffold_819_4
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3383..4834
DNA (1452bp) protein (484aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.-); K01913 [EC:6.2.1.-] rbh
Putative long-chain-fatty-acid--CoA ligase n=3 Tax=Proteobacteria RepID=Q13VV4_BURXL rbh
Uncharacterized protein {ECO:0000313|EMBL:AIU93828.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
SCNpilot_cont_750_bf_scaffold_819_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6055..7527
DNA (1473bp) protein (491aa)
Transposase number 1 for insertion sequence NGRIS-5f n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3A7_9RHIZ rbh
Transposase number 1 for insertion sequence NGRIS-5f {ECO:0000313|EMBL:EHK52539.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transposase rbh
SCNpilot_cont_750_bf_scaffold_819_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7524..8417
DNA (894bp) protein (298aa)
Transposase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3A6_9RHIZ rbh
Transposase {ECO:0000313|EMBL:EHK52538.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transposase rbh
SCNpilot_cont_750_bf_scaffold_819_7
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8595..9773
DNA (1179bp) protein (393aa)
Putative reverse transcriptase-maturase-endonuclease n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q140E0_BURXL rbh
reverse transcriptase-maturase-endonucleas rbh
Putative reverse transcriptase-maturase-endonuclease {ECO:0000313|EMBL:ABE30299.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_750_bf_scaffold_819_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10022..10210
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2L0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33527.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
transposase
SCNpilot_cont_750_bf_scaffold_819_9
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..11188)
DNA (852bp) protein (284aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8E1 rbh
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:KFI29955.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
fumarylacetoacetate hydrolase family protein
SCNpilot_cont_750_bf_scaffold_819_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11249..12160)
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003620501
SCNpilot_cont_750_bf_scaffold_819_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12211..13329)
DNA (1119bp) protein (373aa)
Putative TRAP-type mannitol/chloroaromatic compound transporter, periplasmic component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ATP0_AZOBR
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIB14734.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative TRAP-type mannitol/chloroaromatic compound transporter, periplasmic component
SCNpilot_cont_750_bf_scaffold_819_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13399..14529
DNA (1131bp) protein (377aa)
Putative D-galactonate dehydratase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV30_9PROT rbh
Putative D-galactonate dehydratase {ECO:0000313|EMBL:EHM03197.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_819_13
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14526..15248
DNA (723bp) protein (241aa)
Transcriptional regulator n=1 Tax=Thauera sp. 63 RepID=N6YC20_9RHOO
Transcriptional regulator {ECO:0000313|EMBL:ENO79718.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
aphS; transcriptional regulator
SCNpilot_cont_750_bf_scaffold_819_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16334..16807
DNA (474bp) protein (158aa)
transposase ISRm2011 n=1 Tax=Rhizobium leguminosarum RepID=UPI000370CB21
ISRm2011-2 transposase protein
ISRm2011-2 transposase protein {ECO:0000313|EMBL:CCE97411.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_750_bf_scaffold_819_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17882..18001)
DNA (120bp) protein (40aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.184)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SP76_NITWN
Dehydrogenase {ECO:0000313|EMBL:KIZ40677.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_bf_scaffold_819_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18359..20062)
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J3Q9_RHOP2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD04901.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_819_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20574..21458)
DNA (885bp) protein (295aa)
catechol 1,2-dioxygenase (EC:1.13.11.1); K03381 catechol 1,2-dioxygenase [EC:1.13.11.1]
Putative Catechol 1,2-dioxygenase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQD1_BRASO
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48694.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_bf_scaffold_819_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21479..23233)
DNA (1755bp) protein (585aa)
tfdB; 2,4-dichlorophenol 6-monooxygenase (EC:1.14.13.20); K10676 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20]
2,4-dichlorophenol 6-monooxygenase (2,4-dichlorophenol hydroxylase) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9X2_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48693.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_bf_scaffold_819_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23253..24314)
DNA (1062bp) protein (354aa)
Putative ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9X1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48692.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_819_20
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24323..25186)
DNA (864bp) protein (288aa)
Putative ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQC8_BRASO
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48691.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_819_21
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25183..25890)
DNA (708bp) protein (236aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T055_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48690.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_819_22
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25890..26609)
DNA (720bp) protein (240aa)
Putative branched-chain amino acid transport ATP-binding protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9W8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48689.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
branched-chain amino acid transport ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_819_23
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26673..27953)
DNA (1281bp) protein (427aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T057_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48688.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_819_24
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27979..29052)
DNA (1074bp) protein (358aa)
maleylacetate reductase (EC:1.3.1.32); K00217 maleylacetate reductase [EC:1.3.1.32] rbh
Maleylacetate reductase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRY8_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48687.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_bf_scaffold_819_25
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29049..29924)
DNA (876bp) protein (292aa)
catechol 1,2-dioxygenase (EC:1.13.11.1) rbh
Putative Catechol 1,2-dioxygenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T059_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48686.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_bf_scaffold_819_26
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30020..30259
DNA (240bp) protein (80aa)
Putative transcriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQC2_BRASO
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48685.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_819_27
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30220..30885
DNA (666bp) protein (222aa)
Putative transcriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9W4_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48685.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_819_28
bacterium YEK0313, Bacteria

Not on your lists

31284..32021
DNA (738bp) protein (246aa)
ABC transporter ATPase subunit n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8INI4_AZOC5
Biotin transport ATP-binding protein BioM {ECO:0000313|EMBL:CEJ13778.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATPase; K02006 cobalt/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_819_29
bacterium YEK0313, Bacteria

Not on your lists

32018..32644
DNA (627bp) protein (209aa)
Putative cobalt transport system permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8INI7_AZOC5
Energy-coupling factor transporter transmembrane protein BioN {ECO:0000313|EMBL:CEJ13779.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
cobalt transporter permease; K02008 cobalt/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_819_30
bacterium YEK0313, Bacteria

Not on your lists

32655..33209
DNA (555bp) protein (185aa)
BioY protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3Z7_STAND
Biotin transporter BioY {ECO:0000313|EMBL:CEJ13780.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
BioY protein; K03523 putative biotin biosynthesis protein BioY
Displaying items 1-30 of 56 in total

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