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SCNpilot_cont_750_bf_scaffold_853

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_853_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..545
DNA (543bp) protein (181aa)
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGZ6_NITHX
ATPase
ATPase associated with various cellular activities, AAA_5 {ECO:0000313|EMBL:ABE64501.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_853_2
unknown

Not on your lists

comp(726..965)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_853_3
unknown

Not on your lists

1566..1736
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_853_4
unknown

Not on your lists

1953..2150
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_853_5
unknown

Not on your lists

2213..2674
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_853_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2787..3518
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036DD9FF
TetR family transcriptional regulator {ECO:0000313|EMBL:KIZ47303.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
regulatory protein TetR
SCNpilot_cont_750_bf_scaffold_853_7
bacterium YEK0313, Bacteria

Not on your lists

3724..4098
DNA (375bp) protein (125aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13C18_RHOPS
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ14097.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
AMP-dependent synthetase and ligase
SCNpilot_cont_750_bf_scaffold_853_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4293..4553
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PKX6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81778.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_750_bf_scaffold_853_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4735..6573
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNZ8_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48413.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_cont_750_bf_scaffold_853_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6584..7444
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P3E0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35986.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_bf_scaffold_853_11
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7575..8120)
DNA (546bp) protein (182aa)
UPI0003CF824D related cluster n=1 Tax=unknown RepID=UPI0003CF824D
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EXS68218.1}; Flags: Fragment;; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
UBA/ThiF-type NAD/FAD binding fold containing protein
SCNpilot_cont_750_bf_scaffold_853_12
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8155..9360
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W6G6_9BURK rbh
AAA ATPase {ECO:0000313|EMBL:EJZ32467.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
AAA ATPase rbh
SCNpilot_cont_750_bf_scaffold_853_13
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9350..11866
DNA (2517bp) protein (839aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NNQ8_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEE37035.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_853_14
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11882..14182
DNA (2301bp) protein (767aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX29_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIG52085.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_853_15
unknown

Not on your lists

comp(14467..14676)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_853_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14663..15775)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Rhizobium loti RepID=O68529_RHILI rbh
Uncharacterized protein {ECO:0000313|EMBL:CAD31269.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_853_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15870..17429)
DNA (1560bp) protein (520aa)
UPI0003CF54A8 related cluster n=1 Tax=unknown RepID=UPI0003CF54A8 rbh
Amidohydrolase {ECO:0000313|EMBL:EHP93122.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_853_18
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17705..18736
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028995E5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ03611.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_853_19
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19481..20710
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E54352
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFK53972.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_853_20
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20747..21388)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F141E2
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ESR23800.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Transcriptional regulatory protein (zraR)
SCNpilot_cont_750_bf_scaffold_853_21
unknown

Not on your lists

21553..21651
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_853_22
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22591..24204
DNA (1614bp) protein (538aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ESR23797.1}; EC=6.2.1.3 {ECO:0000313|EMBL:ESR23797.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
AMP-dependent synthetase and ligase; K12507 acyl-CoA synthetase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FEAFC7
SCNpilot_cont_750_bf_scaffold_853_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24216..25343
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EFE469
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_750_bf_scaffold_853_24
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25343..26341
DNA (999bp) protein (333aa)
Quinone oxidoreductase (EC:1.6.5.5) rbh
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000303762B
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KER68466.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCNpilot_cont_750_bf_scaffold_853_25
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26342..27628
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00035DA65A
CAIB/BAIF family protein {ECO:0000313|EMBL:ESR23799.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_750_bf_scaffold_853_26
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27630..28409
DNA (780bp) protein (260aa)
enoyl-CoA hydratase/isomerase; K01661 naphthoate synthase [EC:4.1.3.36]
crotonase n=1 Tax=Afipia birgiae RepID=UPI00030705A0
Crotonase {ECO:0000313|EMBL:KER67914.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCNpilot_cont_750_bf_scaffold_853_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28414..29181
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PND0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42284.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
short chain enoyl-CoA hydratase rbh
SCNpilot_cont_750_bf_scaffold_853_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29174..30952
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PL42_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42286.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acyl-CoA dehydrogenase
SCNpilot_cont_750_bf_scaffold_853_29
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30949..31830
DNA (882bp) protein (294aa)
3-hydroxyacyl-CoA dehydrogenase, NAD-binding; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PI36_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42287.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_bf_scaffold_853_30
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31836..32486
DNA (651bp) protein (217aa)
3-hydroxyacyl-CoA dehydrogenase, NAD-binding; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PVB2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42288.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Displaying items 1-30 of 55 in total

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