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SCNpilot_cont_750_bf_scaffold_863

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_863_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..877)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003751EED rbh
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51953.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
extracellular ligand-binding receptor
SCNpilot_cont_750_bf_scaffold_863_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(892..2541)
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000366ACDB rbh
AMP-dependent synthetase and ligase
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_750_bf_scaffold_863_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2793..3554
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQB7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41720.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
beta-lactamase like protein
SCNpilot_cont_750_bf_scaffold_863_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3630..4691
DNA (1062bp) protein (354aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG64_RHOPX
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADU41788.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_863_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4705..5865
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VF3_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:EKS41766.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_863_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5887..6663
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000379A8E9
Uncharacterized protein {ECO:0000313|EMBL:EKS41765.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_750_bf_scaffold_863_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6824..7717)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV1_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI07618.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7866..10151
DNA (2286bp) protein (762aa)
Regulatory protein NosR n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV0_OLICO rbh
regulatory protein NosR rbh
Regulatory protein NosR {ECO:0000313|EMBL:AEI07619.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10169..12124
DNA (1956bp) protein (652aa)
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Flags: Precursor;; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nosZ; nitrous-oxide reductase NosZ (EC:1.7.2.4); K00376 nitrous-oxide reductase [EC:1.7.2.4] rbh
Nitrous-oxide reductase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU9_OLICO rbh
SCNpilot_cont_750_bf_scaffold_863_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12150..13514
DNA (1365bp) protein (455aa)
Copper-binding periplasmic protein NosD n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU8_OLICO rbh
periplasmic copper-binding protein; K07218 nitrous oxidase accessory protein rbh
Copper-binding periplasmic protein NosD {ECO:0000313|EMBL:AEI07621.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13511..14422
DNA (912bp) protein (304aa)
Copper transport ATP-binding protein NosF n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU7_OLICO
nosF; copper transport ATP-binding protein NosF
Copper transport ATP-binding protein NosF {ECO:0000313|EMBL:AEI07622.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14419..15246
DNA (828bp) protein (276aa)
Membrane protein NosY n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU6_OLICO
membrane protein NosY; K01992 ABC-2 type transport system permease protein
Membrane protein NosY {ECO:0000313|EMBL:AEI07623.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15243..15788
DNA (546bp) protein (182aa)
NosL family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBU5_OLICO rbh
NosL protein rbh
NosL family protein {ECO:0000313|EMBL:AEI07624.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15800..16795
DNA (996bp) protein (332aa)
ApbE family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=F8BXU6_OLICO rbh
ApbE family protein; K03734 thiamine biosynthesis lipoprotein rbh
ApbE family protein {ECO:0000313|EMBL:AEI07625.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16885..17274
DNA (390bp) protein (130aa)
Cytochrome c2 n=2 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=F8BXU7_OLICO
cycA; cytochrome c2; K08738 cytochrome c
Cytochrome c2 {ECO:0000313|EMBL:AEI07626.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17665..18168)
DNA (504bp) protein (168aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBT3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07636.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_863_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18347..19849
DNA (1503bp) protein (501aa)
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] rbh
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV6_MESSB rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:EXL03223.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_750_bf_scaffold_863_18
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20095..20643
DNA (549bp) protein (183aa)
Lipid carrier protein-like protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9J8_9RHIZ
Lipid carrier {ECO:0000313|EMBL:EZQ13520.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
lipid carrier protein-like protein
SCNpilot_cont_750_bf_scaffold_863_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20640..21194
DNA (555bp) protein (185aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-]
Peptidase U32 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSC9_HYPDA
Peptidase U32 {ECO:0000313|EMBL:ADJ22388.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 19 items

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