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SCNpilot_cont_750_bf_scaffold_906

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_906_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..667)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKW3_RHOPX
hypothetical protein; K09989 hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43352.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_906_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

751..1005
DNA (255bp) protein (85aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031CC327
Uncharacterized protein {ECO:0000313|EMBL:EKS35900.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_906_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1105..1230
DNA (126bp) protein (42aa)
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133Q4_RHOPS
ATPase AAA
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ACF02634.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_bf_scaffold_906_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1241..1861
DNA (621bp) protein (207aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPN6_9BRAD
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ERF86401.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ATPase
SCNpilot_cont_750_bf_scaffold_906_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1948..3450
DNA (1503bp) protein (501aa)
FAD-containing monooxygenase EthA n=1 Tax=Bradyrhizobium elkanii RepID=UPI000317DA5D rbh
FAD-containing monooxygenase EthA {ECO:0000313|EMBL:KJC61053.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative monooxygenase
SCNpilot_cont_750_bf_scaffold_906_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3994..5049
DNA (1056bp) protein (352aa)
vanillate O-demethylase oxygenase subunit; K03862 vanillate monooxygenase [EC:1.14.13.82] rbh
Vanillate monooxygenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRV7_9BRAD rbh
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KJC40359.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_750_bf_scaffold_906_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5078..5830
DNA (753bp) protein (251aa)
GntR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003081DED rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC40358.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
transcriptional regulator; K11475 GntR family transcriptional regulator, vanillate catabolism transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_906_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..6827
DNA (981bp) protein (327aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K03863 vanillate monooxygenase [EC:1.14.13.82]
diguanylate cyclase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345AF13
Diguanylate cyclase {ECO:0000313|EMBL:KJC61548.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_bf_scaffold_906_9
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6906..8531)
DNA (1626bp) protein (542aa)
Putative choline (Or alcohol) dehydrogenase {ECO:0000313|EMBL:CCE12030.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CCE12030.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative choline (Or alcohol) dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZZ2_9BRAD rbh
GMC type oxidoreductase
SCNpilot_cont_750_bf_scaffold_906_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8544..9137)
DNA (594bp) protein (198aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IYU8_RHOP2
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD06612.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_906_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9319..10248)
DNA (930bp) protein (310aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17] rbh
Possible gluconolactonase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N3R9_RHOPA rbh
Gluconolaconase {ECO:0000313|EMBL:KIZ37101.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_bf_scaffold_906_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10676..11899
DNA (1224bp) protein (408aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F1A3D rbh
RNA polymerase sigma-32 factor {ECO:0000313|EMBL:ERF81111.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative ABC-type branched-chain amino acid transporter rbh
SCNpilot_cont_750_bf_scaffold_906_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12096..12443)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210J1_RHOPB
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44306.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_906_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12578..12874
DNA (297bp) protein (99aa)
Excinuclease ABC, C subunit domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KA4_RHOP5
excinuclease ABC subunit C; K07461 putative endonuclease
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:ABJ07630.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_750_bf_scaffold_906_15
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12956..13162
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000308316D
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44102.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_906_16
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13625..14080)
DNA (456bp) protein (152aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJW1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ31318.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_906_17
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14097..15791)
DNA (1695bp) protein (565aa)
Putative acid-thiol ligase {ECO:0000313|EMBL:CCD87603.1}; EC=6.2.1.- {ECO:0000313|EMBL:CCD87603.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
acid-thiol ligase (EC:6.2.1.-); K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32] rbh
Putative acid-thiol ligase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S076_9BRAD rbh
SCNpilot_cont_750_bf_scaffold_906_18
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16228..16719)
DNA (492bp) protein (164aa)
Putative transcriptional regulatory protein, MarR family n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6Z5_9BRAD
Putative transcriptional regulatory protein, MarR family {ECO:0000313|EMBL:CCE02222.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
MarR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_906_19
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16985..17824)
DNA (840bp) protein (280aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJC34164.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJC34164.1};; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Bll6081 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HB3_BRADU
SCNpilot_cont_750_bf_scaffold_906_20
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18009..18770)
DNA (762bp) protein (254aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJW9_9BRAD
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EHR04680.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
oxidoreductase
SCNpilot_cont_750_bf_scaffold_906_21
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19285..20103
DNA (819bp) protein (273aa)
alpha/beta hydrolase (EC:3.1.1.1 3.1.1.24); K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQP9_9BRAD
Hydrolase {ECO:0000313|EMBL:EJZ31306.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_750_bf_scaffold_906_22
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20610..21389
DNA (780bp) protein (260aa)
Putative short-chain specific acyl-CoA dehydrogenase (Butyryl-CoA dehydrogenase) {ECO:0000313|EMBL:CCD87612.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CCD87612.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
BEC protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003777D61
BEC protein
SCNpilot_cont_750_bf_scaffold_906_23
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21656..23173
DNA (1518bp) protein (506aa)
Putative O-succinylbenzoate-CoA ligase {ECO:0000313|EMBL:CCD87613.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CCD87613.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
Putative O-succinylbenzoate-CoA ligase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SWG4_9BRAD
SCNpilot_cont_750_bf_scaffold_906_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23340..24434
DNA (1095bp) protein (365aa)
opine dehydrogenase (EC:1.5.1.28); K04940 opine dehydrogenase [EC:1.5.1.28] rbh
Glycerol-3-phosphate dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJX3_9BRAD
Opine dehydrogenase {ECO:0000313|EMBL:AHY53153.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_cont_750_bf_scaffold_906_25
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24736..25731
DNA (996bp) protein (332aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037BC7A8
Putative 3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGJ66548.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_750_bf_scaffold_906_26
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26079..27125)
DNA (1047bp) protein (349aa)
Bll6088 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HA6_BRADU
hypothetical protein
Bll6088 protein {ECO:0000313|EMBL:BAC51353.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_750_bf_scaffold_906_27
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27317..27859
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035FF5F2
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABD54258.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
SCNpilot_cont_750_bf_scaffold_906_28
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28011..29000)
DNA (990bp) protein (330aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJY0_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08890.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_906_29
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29228..30580
DNA (1353bp) protein (451aa)
Malonyl-CoA decarboxylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC29_9BRAD
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:ERF81125.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
decarboxylase
SCNpilot_cont_750_bf_scaffold_906_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30629..31087
DNA (459bp) protein (153aa)
Excinuclease ABC, C subunit-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219V8_RHOPB
excinuclease ABC subunit C
Excinuclease ABC, C subunit-like {ECO:0000313|EMBL:ABD86828.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Displaying items 1-30 of 34 in total

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