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SCNpilot_cont_750_bf_scaffold_907

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_907_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)
ChrB domain-containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P7_9BRAD
ChrB domain-containing protein {ECO:0000313|EMBL:EFI52927.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_750_bf_scaffold_907_2
unknown

Not on your lists

comp(709..930)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_907_3
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1100..1252)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00031ED284
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGB26574.1}; Flags: Precursor;; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
SCNpilot_cont_750_bf_scaffold_907_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1573..2367)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375DC2C
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:BAB51110.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_750_bf_scaffold_907_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2513..2659)
DNA (147bp) protein (49aa)
Putative lipoprotein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWF7_9CHLR
Putative lipoprotein {ECO:0000313|EMBL:EFH84540.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
lipoprotein
SCNpilot_cont_750_bf_scaffold_907_6
unknown

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comp(2649..2900)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_907_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3052..3306)
DNA (255bp) protein (85aa)
Type IV pilus assembly PilZ n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218S5_RHOPB
Pilus assembly protein PilZ {ECO:0000313|EMBL:KJC60171.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
type IV pilus assembly PilZ
SCNpilot_cont_750_bf_scaffold_907_8
unknown

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comp(3351..3950)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_907_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4018..4731)
DNA (714bp) protein (238aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4K1_9BRAD
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_750_bf_scaffold_907_10
unknown

Not on your lists

comp(4728..5300)
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_907_11

Not on your lists

comp(5346..5990)
DNA (645bp) protein (215aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4K2_9BRAD
Marine sediment metagenome DNA, contig: S03H2_S17422 {ECO:0000313|EMBL:GAH72223.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
two-component response regulator protein
SCNpilot_cont_750_bf_scaffold_907_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6486..7457)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHJ4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42132.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_907_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7636..7950
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUR6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42133.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09700 hypothetical protein
SCNpilot_cont_750_bf_scaffold_907_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7992..8525
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMW6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42134.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome B561; K12262 cytochrome b561
SCNpilot_cont_750_bf_scaffold_907_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8979..9566
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NY98_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31168.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
mmfC2; hypothetical protein
SCNpilot_cont_750_bf_scaffold_907_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9567..9785
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRI8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42140.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_907_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9916..11418)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHH3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42112.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sufI; multicopper oxidase
SCNpilot_cont_750_bf_scaffold_907_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11737..12063
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUP6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42113.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
AsrR family transcriptional regulator; K03892 ArsR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_907_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12060..12581
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMU4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42114.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rhodanese domain-containing protein
SCNpilot_cont_750_bf_scaffold_907_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12601..13401
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRG1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42115.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K07090 rbh
SCNpilot_cont_750_bf_scaffold_907_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13433..14353
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKK8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42116.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
beta-lactamase domain-containing protein
SCNpilot_cont_750_bf_scaffold_907_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14343..14732
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHH9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42117.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rhodanese domain-containing protein
SCNpilot_cont_750_bf_scaffold_907_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14781..14900
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUQ0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42118.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_907_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15082..15438
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMV0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42119.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DoxX domain
SCNpilot_cont_750_bf_scaffold_907_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15627..16037
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRG7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42120.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_907_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16048..17496
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKL3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42121.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
5'-nucleotidase rbh
SCNpilot_cont_750_bf_scaffold_907_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17656..18306
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHI4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42122.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c, class I
SCNpilot_cont_750_bf_scaffold_907_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18303..19283
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUQ4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42123.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c, class I
Displaying 28 items

View Taxonomy