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SCNpilot_cont_750_bf_scaffold_967

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_967_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225..3851
DNA (3627bp) protein (1209aa)
conjugal transfer protein TraA n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAF2 rbh
Putative conjugal transfer protein TraA {ECO:0000313|EMBL:EYR84192.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ti-type conjugative transfer relaxase TraA rbh
SCNpilot_cont_750_bf_scaffold_967_2
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3860..4606
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037A96CB rbh
Uncharacterized protein {ECO:0000313|EMBL:EHS51619.1}; Flags: Fragment;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_967_3
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4619..5140
DNA (522bp) protein (174aa)
Bile acid:sodium symporter n=1 Tax=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) RepID=A4Y6V4_SHEPC
Sodium Bile acid symporter family protein {ECO:0000313|EMBL:KIN90337.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
bile acid:sodium symporter
SCNpilot_cont_750_bf_scaffold_967_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5170..5616
DNA (447bp) protein (149aa)
arsenic resistance protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035EC1EE
ArsB-like efflux protein
Putative efflux protein {ECO:0000313|EMBL:CDW96502.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SCNpilot_cont_750_bf_scaffold_967_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5613..5888)
DNA (276bp) protein (92aa)
Putative cytochrome c biogenesis protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ENM6_9RHIZ
Putative cytochrome c biogenesis protein {ECO:0000313|EMBL:CCV05770.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
cytochrome biogenesis protein
SCNpilot_cont_750_bf_scaffold_967_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6139..6447)
DNA (309bp) protein (103aa)
Major facilitator superfamily permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q5N4_9RHIZ
Major facilitator transporter {ECO:0000313|EMBL:EXL10564.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Major facilitator superfamily permease
SCNpilot_cont_750_bf_scaffold_967_7
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6519..6848
DNA (330bp) protein (110aa)
ArsR1 n=1 Tax=Ochrobactrum tritici RepID=A1XP68_9RHIZ
ArsR1 {ECO:0000313|EMBL:ABF22608.1}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
regulatory protein ArsR
SCNpilot_cont_750_bf_scaffold_967_8
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6937..7311
DNA (375bp) protein (125aa)
ArsD n=1 Tax=Ochrobactrum tritici RepID=A1XP69_9RHIZ
ArsD {ECO:0000313|EMBL:ABF22609.1}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
arsenic resistance operon trans-acting repressor ArsD
SCNpilot_cont_750_bf_scaffold_967_9
Paracoccus methylutens, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7323..9077
DNA (1755bp) protein (585aa)
arsenite transporter ATPase-like protein; K01551 arsenite-transporting ATPase [EC:3.6.3.16] rbh
Putative oxyanion-translocating ATPase n=1 Tax=Paracoccus methylutens RepID=A7UBP9_9RHOB rbh
Putative oxyanion-translocating ATPase {ECO:0000313|EMBL:ABS87613.1}; TaxID=135742 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus methylutens.;"
SCNpilot_cont_750_bf_scaffold_967_10
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9090..9563
DNA (474bp) protein (158aa)
CBS domain protein n=1 Tax=Ochrobactrum tritici RepID=A1XP71_9RHIZ rbh
CBS domain protein {ECO:0000313|EMBL:ABF22611.1}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
CBS domain-like protein
SCNpilot_cont_750_bf_scaffold_967_11
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9565..10851
DNA (1287bp) protein (429aa)
Arsenical pump membrane protein n=1 Tax=Ochrobactrum tritici RepID=A1XP72_9RHIZ rbh
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
arsenical pump membrane protein; K03893 arsenical pump membrane protein rbh
SCNpilot_cont_750_bf_scaffold_967_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11061..12482
DNA (1422bp) protein (474aa)
putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase (EC:1.8.1.14) rbh
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CAZ89747.1}; EC=1.8.1.14 {ECO:0000313|EMBL:CAZ89747.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
CoA-disulfide reductase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6F15B rbh
SCNpilot_cont_750_bf_scaffold_967_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12951..13508
DNA (558bp) protein (186aa)
Recombinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDK3_9RHIZ rbh
Recombinase {ECO:0000313|EMBL:EHH10173.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
transposon Tn552 DNA-invertase BinR
SCNpilot_cont_750_bf_scaffold_967_14
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13707..13982
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037EB2A6
Uncharacterized protein {ECO:0000313|EMBL:GAK73406.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_967_15
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14166..14876
DNA (711bp) protein (237aa)
Replication protein A n=2 Tax=Rhizobium radiobacter RepID=B9JQR1_AGRRK rbh
Uncharacterized protein {ECO:0000313|EMBL:GAK73407.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
repA; replication protein A rbh
SCNpilot_cont_750_bf_scaffold_967_16
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15152..15421
DNA (270bp) protein (90aa)
CopG family transcriptional regulator n=3 Tax=Bacteria RepID=C6KTN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELT46230.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
CopG family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_967_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15418..15723
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=M5JTH8_9RHIZ
Plasmid stabilization system protein {ECO:0000313|EMBL:EYR84197.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_967_18
bacterium YEK0313, Bacteria

Not on your lists

15790..16410
DNA (621bp) protein (207aa)
Partitioning protein ParA n=1 Tax=uncultured bacterium RepID=C6KTN8_9BACT
Chromosome partitioning protein ParA {ECO:0000313|EMBL:CEJ16316.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative ATPase, ParA type; K03496 chromosome partitioning protein
SCNpilot_cont_750_bf_scaffold_967_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16450..16743
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAE7
Uncharacterized protein {ECO:0000313|EMBL:CDN96151.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_967_20
unknown

Not on your lists

16856..17332
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_967_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17380..17682)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Rhizobium radiobacter RepID=B9JQR5_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM31473.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_750_bf_scaffold_967_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17672..17941)
DNA (270bp) protein (90aa)
Ti-type conjugative transfer system protein TraG n=2 Tax=Rhizobium radiobacter RepID=B9JQR6_AGRRK
traG; Ti-type conjugative transfer system protein TraG; K03205 type IV secretion system protein VirD4
Ti-type conjugative transfer system protein TraG {ECO:0000313|EMBL:ACM31474.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Displaying 22 items

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