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SCNpilot_cont_750_bf_scaffold_975

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_975_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_975_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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84..1469
DNA (1386bp) protein (462aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK53_NITHX
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE63394.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_975_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1466..2314
DNA (849bp) protein (283aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK52_NITHX rbh
ABC transporter rbh
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABE63395.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_975_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2412..3158
DNA (747bp) protein (249aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK51_NITHX
ABC transporter
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE63396.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_975_5
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3448..3669
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFC5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05163.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_975_6
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3705..5252
DNA (1548bp) protein (516aa)
Na+/solute symporter n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5W5A7_BURSC
Na+/solute symporter; K03307 solute:Na+ symporter, SSS family
Na+/solute symporter {ECO:0000313|EMBL:ADG14949.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCNpilot_cont_750_bf_scaffold_975_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5488..6609
DNA (1122bp) protein (374aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IT91_9BRAD rbh
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:ERF86064.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
extracellular ligand-binding receptor rbh
SCNpilot_cont_750_bf_scaffold_975_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6820..6981)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036BD613
Addiction module antitoxin {ECO:0000313|EMBL:KJC36635.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_975_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7253..7987)
DNA (735bp) protein (245aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07R40_RHOP5 rbh
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KIZ47736.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein rbh
SCNpilot_cont_750_bf_scaffold_975_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8296..9297
DNA (1002bp) protein (334aa)
Peptidase S58, DmpA n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WX89_9BRAD
Peptidase S58, DmpA {ECO:0000313|EMBL:EAQ35401.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
peptidase S58, DmpA
SCNpilot_cont_750_bf_scaffold_975_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9353..9562
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BKA5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07216.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_975_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9857..10135
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NAL1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27637.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_975_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10181..11380)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK46_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63401.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_975_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11566..12345)
DNA (780bp) protein (260aa)
Ferredoxin n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNQ7_9BRAD
Ferredoxin {ECO:0000313|EMBL:ERF86066.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
signal transduction protein with EFhand domain
SCNpilot_cont_750_bf_scaffold_975_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12609..13310
DNA (702bp) protein (234aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] rbh
Ribulose-phosphate 3-epimerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H895_9BRAD rbh
SCNpilot_cont_750_bf_scaffold_975_16
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13490..14797
DNA (1308bp) protein (436aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
Adenylosuccinate lyase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DRG8_BRAJP rbh
SCNpilot_cont_750_bf_scaffold_975_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14864..15403
DNA (540bp) protein (180aa)
molybdenum cofactor biosysynthesis protein n=1 Tax=Afipia birgiae RepID=UPI0003189B17
Uncharacterized protein {ECO:0000313|EMBL:EKS36210.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
MOSC domain-containing protein
SCNpilot_cont_750_bf_scaffold_975_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15678..16229)
DNA (552bp) protein (184aa)
Cytochrome B561 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK95_NITHX
cytochrome B561; K12262 cytochrome b561
Cytochrome B561 {ECO:0000313|EMBL:ABE63352.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_975_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16432..17223
DNA (792bp) protein (264aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Glutamate racemase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218L8_RHOPB
SCNpilot_cont_750_bf_scaffold_975_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17853..18233
DNA (381bp) protein (127aa)
30S ribosomal protein S4 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVM3_9BRAD
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
SCNpilot_cont_750_bf_scaffold_975_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18448..19515
DNA (1068bp) protein (356aa)
Putative L-allo-threonine aldolase {ECO:0000313|EMBL:CCE07743.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CCE07743.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative L-allo-threonine aldolase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMQ5_9BRAD
putative L-allo-threonine aldolase
SCNpilot_cont_750_bf_scaffold_975_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19537..19935
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YA51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG58543.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_975_23
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20197..21483)
DNA (1287bp) protein (429aa)
beta-lactamase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B79E4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAR53666.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_750_bf_scaffold_975_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21529..22011)
DNA (483bp) protein (161aa)
Appr-1-p processing domain protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q7J0_RHOPT
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ACF00324.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_bf_scaffold_975_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22074..22412)
DNA (339bp) protein (113aa)
Glutaredoxin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMT7_NITHX
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
glutaredoxin-like protein; K07390 monothiol glutaredoxin
SCNpilot_cont_750_bf_scaffold_975_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22685..23971
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218M6_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87160.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_975_27
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24001..24972
DNA (972bp) protein (324aa)
methyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000301422A
Methyltransferase {ECO:0000313|EMBL:KJC37036.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_975_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24948..26162)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD23_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36223.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
low temperature requirement A
SCNpilot_cont_750_bf_scaffold_975_29
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26195..26428)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMP8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE07736.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
BolA family protein
SCNpilot_cont_750_bf_scaffold_975_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26594..26959
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ITQ4_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD08406.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Displaying items 1-30 of 38 in total

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