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SCNpilot_cont_750_bf_scaffold_984

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_984_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..116
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEM8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KIZ44374.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_984_2
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(657..1571)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00031B517C
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:ABZ74305.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_750_bf_scaffold_984_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1842..3098
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC7_NITHX rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR77536.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_984_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3127..4047)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC6_NITHX rbh
Peptidase {ECO:0000313|EMBL:ETR77537.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_984_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4044..4544)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC5_NITHX
Transcriptional regulator {ECO:0000313|EMBL:ETR77538.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_984_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4549..5169)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC4_NITHX rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR77539.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_984_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5166..5378)
DNA (213bp) protein (71aa)
CopG-like DNA-binding n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC3_NITHX
Transcriptional regulator {ECO:0000313|EMBL:ETR77540.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
CopG-like DNA-binding
SCNpilot_cont_750_bf_scaffold_984_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5536..6501
DNA (966bp) protein (322aa)
DNA polymerase, beta-like region n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ8_MESSB rbh
DNA polymerase {ECO:0000313|EMBL:ETR77541.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
DNA polymerase, beta-like region rbh
SCNpilot_cont_750_bf_scaffold_984_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6511..7026
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ7_MESSB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR77542.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_984_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7026..7970
DNA (945bp) protein (315aa)
AAA ATPase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF08_9BRAD rbh
ATPase {ECO:0000313|EMBL:ETR77543.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
AAA ATPase, central region rbh
SCNpilot_cont_750_bf_scaffold_984_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7981..9516
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ5_MESSB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR77544.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_984_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9587..9775)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK08_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ40667.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_984_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9850..10353)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEZ9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65198.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_984_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10350..10691)
DNA (342bp) protein (114aa)
Transcriptional regulator AbrB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEZ8_NITHX
regulator PrlF
Transcriptional regulator AbrB {ECO:0000313|EMBL:ABE65199.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_984_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10920..11879
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B9180 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIC29512.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
putative aminotransferase protein rbh
SCNpilot_cont_750_bf_scaffold_984_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..15526
DNA (3648bp) protein (1216aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJI9_9SPHN rbh
DNA/RNA helicase domain-containing protein {ECO:0000313|EMBL:AIC29511.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
putative DNA helicase protein rbh
SCNpilot_cont_750_bf_scaffold_984_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15545..16762)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJZ6_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08358.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_984_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16959..17405)
DNA (447bp) protein (149aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIC0_9BRAD
Plasmid maintenance toxin (PemK-like) {ECO:0000313|EMBL:ETR79465.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_984_19
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17409..17666)
DNA (258bp) protein (86aa)
Prevent-host-death protein n=2 Tax=Bradyrhizobiaceae RepID=Q1QFA3_NITHX
Prevent-host-death protein {ECO:0000313|EMBL:ETR79464.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
prevent-host-death protein
SCNpilot_cont_750_bf_scaffold_984_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17838..18251
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKW5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:ETR79463.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
Displaying 20 items

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