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SCNpilot_cont_750_bf_scaffold_2080

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2080_1
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..324
DNA (324bp) protein (108aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JDK6_RHOER
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN90208.1}; TaxID=596309 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis SK121.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_2080_2
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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377..1099
DNA (723bp) protein (241aa)
Putative branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E5L3_NOCAS
Putative branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAD85077.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_2080_3
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1096..1980
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=Actinomadura atramentaria RepID=UPI0003656A8A rbh
Putative High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EPJ37952.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_2080_4
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1977..3101
DNA (1125bp) protein (375aa)
Urea ABC transporter, permease UrtC n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XDB8_STRVR
Urea ABC transporter, permease UrtC {ECO:0000313|EMBL:EFL36765.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_2080_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3098..3808
DNA (711bp) protein (237aa)
Putative hydrolase or acyltransferase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GKA2_9PROT
Alpha/beta hydrolase {ECO:0000313|EMBL:KGM32257.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
alpha/beta hydrolase
SCNpilot_cont_750_bf_scaffold_2080_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3918..5156)
DNA (1239bp) protein (413aa)
lldD; L-lactate dehydrogenase (EC:1.1.2.3); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
lactate dehydrogenase n=1 Tax=Leifsonia sp. 109 RepID=UPI00035E8366
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:EPD84371.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_cont_750_bf_scaffold_2080_7
unknown

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5293..5487
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2080_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5635..6771)
DNA (1137bp) protein (379aa)
galactonate dehydratase; K01684 galactonate dehydratase [EC:4.2.1.6] rbh
Galactonate dehydratase {ECO:0000313|EMBL:AEW00069.1}; EC=4.2.1.6 {ECO:0000313|EMBL:AEW00069.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Galactonate dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T744_NIAKG rbh
SCNpilot_cont_750_bf_scaffold_2080_9
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(6901..7701)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A063A
short-chain dehydrogenase/reductase SDR
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_750_bf_scaffold_2080_10
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7703..8548)
DNA (846bp) protein (282aa)
Putative IclR family transcriptional regulator n=1 Tax=Streptomyces sp. Tu6071 RepID=F3ZEE4_9ACTO
Putative IclR family transcriptional regulator {ECO:0000313|EMBL:EGJ79021.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor
SCNpilot_cont_750_bf_scaffold_2080_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8832..9986
DNA (1155bp) protein (385aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037E2AB8 rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66100.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
SCNpilot_cont_750_bf_scaffold_2080_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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10043..10846
DNA (804bp) protein (268aa)
Extracellular solute-binding protein family 5 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4X0_CONWI
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADB48548.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_750_bf_scaffold_2080_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10824..11615
DNA (792bp) protein (264aa)
Extracellular solute-binding protein family 5 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4X0_CONWI rbh
family 5 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADB48548.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 13 items

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