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SCNpilot_cont_750_bf_scaffold_2367

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2367_1
unknown

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1..129
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2367_2
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(186..608)
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
Ribonuclease VapC n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P7V0_9MYCO
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2367_3
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(605..817)
DNA (213bp) protein (71aa)
Toxin-antitoxin system n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVV5_9ACTN
Toxin-antitoxin system {ECO:0000313|EMBL:CCM61935.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SCNpilot_cont_750_bf_scaffold_2367_4
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(913..1899)
DNA (987bp) protein (329aa)
Tyrosine recombinase XerC n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V200_9ACTO
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
integrase family protein; K03733 integrase/recombinase XerC
SCNpilot_cont_750_bf_scaffold_2367_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(2125..3342)
DNA (1218bp) protein (406aa)
DNA protecting protein DprA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBV0_NAKMY rbh
DNA protecting protein DprA; K04096 DNA processing protein rbh
DNA protecting protein DprA {ECO:0000313|EMBL:ACV79454.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2367_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(3339..4856)
DNA (1518bp) protein (506aa)
Mg chelatase, subunit ChlI n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBV1_NAKMY rbh
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein rbh
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ACV79455.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2367_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(4856..5218)
DNA (363bp) protein (121aa)
UPF0102 protein Namu_3123 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBV2_NAKMY
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Namu_3123 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2367_8
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5451..5777)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MY91_SACVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU96039.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
SCNpilot_cont_750_bf_scaffold_2367_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(5863..6669)
DNA (807bp) protein (269aa)
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Ribonuclease n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBV9_NAKMY
SCNpilot_cont_750_bf_scaffold_2367_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(6672..7766)
DNA (1095bp) protein (365aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] rbh
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Signal peptidase I n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBW0_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_2367_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(7944..8297)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBW1_NAKMY
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2367_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8536..8952)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00037DB0AC
Antibiotic efflux protein {ECO:0000313|EMBL:EWC61733.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Major facilitator superfamily Permease
SCNpilot_cont_750_bf_scaffold_2367_13
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9159..9332)
DNA (174bp) protein (58aa)
Transposase IS4 family protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZF0_FRADG
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEH08091.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Displaying 13 items

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