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SCNpilot_cont_750_bf_scaffold_2781

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2781_1
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..1526
DNA (1524bp) protein (508aa)
thiamine pyrophosphate req_uiring enzyme; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
Thiamine pyrophosphate protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M3A2P1_9NOCA
Thiamine pyrophosphate protein {ECO:0000313|EMBL:EME67218.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
SCNpilot_cont_750_bf_scaffold_2781_2
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1829..3307)
DNA (1479bp) protein (493aa)
Arabinose efflux permease family protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X6N4_9PSEU rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EHR51255.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
sugar transport protein rbh
SCNpilot_cont_750_bf_scaffold_2781_3
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3797..4699
DNA (903bp) protein (301aa)
putative DNA ligase-like protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
Putative DNA ligase-like protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4TDI5_9MYCO rbh
Putative DNA ligase-like protein {ECO:0000313|EMBL:EJO86838.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;"
SCNpilot_cont_750_bf_scaffold_2781_4
unknown

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comp(4772..4987)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2781_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(5139..6062)
DNA (924bp) protein (308aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS00_ACIC1 rbh
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein rbh
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:ABK52210.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6062..6949)
DNA (888bp) protein (296aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ9_ACIC1 rbh
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein rbh
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABK52209.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7037..8392)
DNA (1356bp) protein (452aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ8_ACIC1 rbh
extracellular solute-binding protein rbh
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK52208.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8451..10304)
DNA (1854bp) protein (618aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxyacid dehydratase {ECO:0000313|EMBL:ABK52207.1}; EC=4.2.1.9 {ECO:0000313|EMBL:ABK52207.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Dihydroxyacid dehydratase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ7_ACIC1 rbh
SCNpilot_cont_750_bf_scaffold_2781_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10301..10834)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ6_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52206.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_10
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10785..11165)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ6_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52206.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11165..12334)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ5_ACIC1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABK52205.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12605..13174
DNA (570bp) protein (190aa)
Transcriptional regulator, IclR family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ4_ACIC1
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABK52204.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_750_bf_scaffold_2781_13
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13176..14231
DNA (1056bp) protein (352aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRZ3_ACIC1 rbh
alcohol dehydrogenase rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABK52203.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying 13 items

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