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SCNpilot_cont_750_bf_scaffold_2978

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2978_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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544..2883
DNA (2340bp) protein (780aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YUB8_9ACTO rbh
SCNpilot_cont_750_bf_scaffold_2978_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2986..3885)
DNA (900bp) protein (300aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
NAD-dependent protein deacetylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZK5_PSEUX
NAD-dependent deacetylase
SCNpilot_cont_750_bf_scaffold_2978_3
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3951..4526
DNA (576bp) protein (192aa)
Thermoresistant gluconokinase {ECO:0000313|EMBL:KJF24316.1}; EC=2.7.1.12 {ECO:0000313|EMBL:KJF24316.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
gntK; gluconokinase (EC:2.7.1.12); K00851 gluconokinase [EC:2.7.1.12]
Shikimate kinase n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JFX2_RHOER
SCNpilot_cont_750_bf_scaffold_2978_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4513..5217)
DNA (705bp) protein (235aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG86_NAKMY rbh
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator rbh
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ACV80088.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2978_5
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5464..6297
DNA (834bp) protein (278aa)
rhodanese-related sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Putative 3-mercaptopyruvate sulfurtransferase n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TIE6_9ACTO
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
SCNpilot_cont_750_bf_scaffold_2978_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6334..6597
DNA (264bp) protein (88aa)
Histone deacetylase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG84_NAKMY
histone deacetylase; K04768 acetoin utilization protein AcuC
Histone deacetylase {ECO:0000313|EMBL:ACV80086.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2978_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6634..7533
DNA (900bp) protein (300aa)
Histone deacetylase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG84_NAKMY
histone deacetylase; K04768 acetoin utilization protein AcuC
Histone deacetylase {ECO:0000313|EMBL:ACV80086.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2978_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7906..10248
DNA (2343bp) protein (781aa)
GCN5-related N-acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG83_NAKMY rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV80085.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2978_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10369..11388)
DNA (1020bp) protein (340aa)
RNA polymerase sigma factor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG81_NAKMY rbh
RNA polymerase sigma factor SigB; K03087 RNA polymerase nonessential primary-like sigma factor rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2978_10
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11623..12048)
DNA (426bp) protein (142aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Streptomyces sp. AA4 RepID=D9UXQ9_9ACTO
SCNpilot_cont_750_bf_scaffold_2978_11
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12054..13670)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WE19_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAB91986.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
methyltransferase small rbh
SCNpilot_cont_750_bf_scaffold_2978_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13737..14183
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG75_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV80077.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2978_13
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14166..14591)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003674392
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG04416.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Displaying 13 items

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