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SCNpilot_cont_750_bf_scaffold_4184

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4184_1
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1066)
DNA (1065bp) protein (355aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=3 Tax=Ochrobactrum RepID=C4WKD4_9RHIZ
SCNpilot_cont_750_bf_scaffold_4184_2
Brucella sp. NVSL 07-0026, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1223..3865)
DNA (2643bp) protein (881aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=520448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. NVSL 07-0026.;"
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Brucella sp. NVSL 07-0026 RepID=D6LKT4_9RHIZ
SCNpilot_cont_750_bf_scaffold_4184_3
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3850..5289)
DNA (1440bp) protein (480aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Brucella sp. BO2 RepID=E2PJA0_9RHIZ
SCNpilot_cont_750_bf_scaffold_4184_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5539..5913)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=RL7_OCHA4
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_750_bf_scaffold_4184_5
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5965..6483)
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=22 Tax=Brucella RepID=RL10_BRUSI rbh
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;"
SCNpilot_cont_750_bf_scaffold_4184_6
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6856..7557)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 n=2 Tax=Ochrobactrum RepID=C4WKD8_9RHIZ rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
SCNpilot_cont_750_bf_scaffold_4184_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7562..7993)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=RL11_OCHA4
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000313|EMBL:EXL01365.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_750_bf_scaffold_4184_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8196..8723)
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=5 Tax=Ochrobactrum RepID=A6X0A4_OCHA4 rbh
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
SCNpilot_cont_750_bf_scaffold_4184_9
Brucella microti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8748..8954)
DNA (207bp) protein (69aa)
Protein translocase subunit SecE n=230 Tax=Brucellaceae RepID=C9TWG6_BRUPB
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
SCNpilot_cont_750_bf_scaffold_4184_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9484..9609)
DNA (126bp) protein (42aa)
Elongation factor Tu n=262 Tax=Brucellaceae RepID=EFTU_BRUA2
translation elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Displaying 10 items

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