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SCNpilot_cont_750_bf_scaffold_4383

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4383_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..411
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9T5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36355.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
metallophosphoesterase
SCNpilot_cont_750_bf_scaffold_4383_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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411..1466
DNA (1056bp) protein (352aa)
Glycosyl transferase, group 1 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZM9_RHOP2
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABD06331.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_4383_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1505..2491
DNA (987bp) protein (329aa)
pyridoxal-5'-phosphate-dependent enzyme, beta subunit; K01754 threonine dehydratase [EC:4.3.1.19]
L-threonine ammonia-lyase {ECO:0000313|EMBL:ABD06332.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ABD06332.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
serine/threonine dehydratase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034827E2
SCNpilot_cont_750_bf_scaffold_4383_4
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2516..3655)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000374C565
Putative uncharacterized protein {ECO:0000313|EMBL:EHR04527.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4383_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4251..5003
DNA (753bp) protein (251aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219C4_RHOPB
major facilitator transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD87012.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_4383_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4973..5968)
DNA (996bp) protein (332aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VM42_RHOPX rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADU45775.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_4383_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6110..7771)
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219B9_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ39890.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4383_8
unknown

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8412..8795
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4383_9
unknown

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8792..9583
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4383_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9623..10156
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG07381.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_bf_scaffold_4383_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10244..10804
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG07381.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_bf_scaffold_4383_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11953..12306
DNA (354bp) protein (118aa)
Hpt protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJ18_RHOPT
Histidine kinase {ECO:0000313|EMBL:KIZ39323.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Hpt protein
SCNpilot_cont_750_bf_scaffold_4383_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12419..12739
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ITC4_RHOP2
ferredoxin; K04755 ferredoxin, 2Fe-2S
Ferredoxin {ECO:0000313|EMBL:ABD08536.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_4383_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12834..13286)
DNA (453bp) protein (151aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
YbgC/YbaW family acyl-CoA thioester hydrolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ITT0_9BRAD
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:ERF86259.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_750_bf_scaffold_4383_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13315..14487
DNA (1173bp) protein (391aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
ferredoxin--NADP reductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035F86C1
SCNpilot_cont_750_bf_scaffold_4383_16
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14700..15290
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN11_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE07849.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4383_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15420..17345)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN13_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE07851.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
Displaying 17 items

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