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SCNpilot_cont_750_bf_scaffold_6194

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_6194_1
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..640
DNA (639bp) protein (213aa)
Two-component system response regulator TcsR4 n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XXW6_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:GAM46262.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
two component transcriptional regulator
SCNpilot_cont_750_bf_scaffold_6194_2
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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637..2103
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
Putative two-component system sensor kinase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WW02_9ACTO
two-component system sensor kinase
SCNpilot_cont_750_bf_scaffold_6194_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2188..3969)
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00037690A2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHL00111.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_6194_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4114..5646)
DNA (1533bp) protein (511aa)
Beta-galactoside-specific lectin 3 (EC:3.2.2.22) rbh
Beta-galactoside-specific lectin 3 {ECO:0000313|EMBL:AEV84333.1}; EC=3.2.2.22 {ECO:0000313|EMBL:AEV84333.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Beta-galactoside-specific lectin 3 n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SHS5_ACTS5 rbh
SCNpilot_cont_750_bf_scaffold_6194_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5643..6332)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4E433
Uncharacterized protein {ECO:0000313|EMBL:EXG81051.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6194_6
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6329..8176)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B40960 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL90364.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_cont_750_bf_scaffold_6194_7
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8192..9049)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B37FD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV08993.1}; Flags: Precursor;; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134); (Listeria denitrificans).;"
SCNpilot_cont_750_bf_scaffold_6194_8
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9046..9825)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B72D92
Fimbrial assembly protein {ECO:0000313|EMBL:KGM10099.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_750_bf_scaffold_6194_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9822..10913)
DNA (1092bp) protein (364aa)
pilus biosynthesis protein PilM n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6F1CD rbh
pilM; type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGL14720.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_750_bf_scaffold_6194_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10972..11412)
DNA (441bp) protein (147aa)
Fimbrial protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZ20_ACTS5
Type IV pilin PilA {ECO:0000313|EMBL:KHD78887.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
fimA; Fimbrial protein
SCNpilot_cont_750_bf_scaffold_6194_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11599..12555)
DNA (957bp) protein (319aa)
pilus biosynthesis protein PilC n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B32926 rbh
Type II secretory pathway, component PulF {ECO:0000313|EMBL:EXG81058.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative type IV pilus biogenesis protein PilC
Displaying 11 items

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