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SCNpilot_cont_750_bf_scaffold_6684

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_6684_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..221)
DNA (219bp) protein (73aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISQ8_RHOP2
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD08752.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_6684_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218..988)
DNA (771bp) protein (257aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISQ7_RHOP2 rbh
binding-protein dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD08753.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_6684_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1088..2212
DNA (1125bp) protein (375aa)
Mandelate racemase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9Y9_BRAJP rbh
mandelate racemase rbh
Mandelate racemase {ECO:0000313|EMBL:BAL12845.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_6684_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2216..3454
DNA (1239bp) protein (413aa)
Putative glucose-methanol-choline (GMC) oxidoreductase choline dehydrogenase (CHD) {ECO:0000313|EMBL:CCE10554.1}; EC=1.1.99.- {ECO:0000313|EMBL:CCE10554.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
choline dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003782C9A
glucose-methanol-choline oxidoreductase
SCNpilot_cont_750_bf_scaffold_6684_5
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3463..3810
DNA (348bp) protein (116aa)
Putative glucose-methanol-choline (GMC) oxidoreductase choline dehydrogenase (CHD) {ECO:0000313|EMBL:CCD98923.1}; EC=1.1.99.- {ECO:0000313|EMBL:CCD98923.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Putative glucose-methanol-choline (GMC) oxidoreductase choline dehydrogenase (CHD) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXJ6_9BRAD
alcohol dehydrogenase
SCNpilot_cont_750_bf_scaffold_6684_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3807..4529
DNA (723bp) protein (241aa)
GntR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F488ED
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABD08756.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_6684_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4560..5501)
DNA (942bp) protein (314aa)
Putative transcriptional regulatory protein (Nitrogen assimilation control protein) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL02_BRASB
transcriptional regulator
Putative transcriptional regulatory protein (Nitrogen assimilation control protein) {ECO:0000313|EMBL:ABQ36846.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_6684_8
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5738..6271)
DNA (534bp) protein (178aa)
Putative acyl-CoA transferase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL03_BRASB
acyl-CoA transferase
Putative acyl-CoA transferase {ECO:0000313|EMBL:ABQ36847.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_6684_9
unknown

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comp(6268..6879)
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_6684_10
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6988..9579)
DNA (2592bp) protein (864aa)
aldehyde dehydrogenase (EC:1.2.1.-); K00155 [EC:1.2.1.-] rbh
Aldehyde dehydrogenase (ALDDH) {ECO:0000313|EMBL:ABQ36848.1}; EC=1.2.1.- {ECO:0000313|EMBL:ABQ36848.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Aldehyde dehydrogenase (ALDDH) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL04_BRASB rbh
SCNpilot_cont_750_bf_scaffold_6684_11
unknown

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9673..9816
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_6684_12
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9810..9983)
DNA (174bp) protein (58aa)
ribose ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Putative ribose ABC transporter (ATP-binding protein) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRN6_9BRAD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS10782.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
SCNpilot_cont_750_bf_scaffold_6684_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9980..10786)
DNA (807bp) protein (269aa)
ribose ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Monosaccharide ABC transporter ATP-binding protein, CUT2 family {ECO:0000313|EMBL:ABQ36850.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABQ36850.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL06_BRASB
SCNpilot_cont_750_bf_scaffold_6684_14
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11186..12262)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRN5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD84612.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_6684_15
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12259..12387)
DNA (129bp) protein (43aa)
Inner-membrane translocator n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WN15_VEREI
inner-membrane translocator
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KCB42692.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
SCNpilot_cont_750_bf_scaffold_6684_16
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12654..13928
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39BJ9_BURS3
Uncharacterized protein {ECO:0000313|EMBL:ABB10162.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_cont_750_bf_scaffold_6684_17
unknown

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13912..14103
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_6684_18
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14305..14469)
DNA (165bp) protein (55aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL09_BRASB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS10779.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
ABC transporter ribose binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_6684_19
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14439..15251)
DNA (813bp) protein (271aa)
Putative ABC transporter (Ribose binding protein) exported protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRN3_9BRAD
Putative ABC transporter (Ribose binding protein) exported protein {ECO:0000313|EMBL:CCD84610.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
ABC transporter ribose binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_6684_20
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15370..16413)
DNA (1044bp) protein (348aa)
ABC transporter permease (EC:3.6.3.17); K02057 simple sugar transport system permease protein rbh
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABQ36854.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABQ36854.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL10_BRASB rbh
SCNpilot_cont_750_bf_scaffold_6684_21
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16704..18746)
DNA (2043bp) protein (681aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICN9_METNO
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57450.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_6684_22
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18938..20542)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIJ2_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51311.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_750_bf_scaffold_6684_23
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20713..21501
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YKH0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ29249.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6684_24
unknown

Not on your lists

21958..22791
DNA (834bp) protein (278aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_6684_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23604..23915
DNA (312bp) protein (104aa)
Putative substrate-binding component of ABC transporter n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF75_RHOPT
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ48209.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Displaying 25 items

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