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SCNpilot_cont_750_bf_scaffold_5418

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_5418_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1256
DNA (1254bp) protein (418aa)
Catecholate siderophore receptor Fiu n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K7_9GAMM
Catecholate siderophore receptor Fiu {ECO:0000313|EMBL:EIL94748.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
catecholate siderophore receptor Fiu; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_750_bf_scaffold_5418_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1550..1885
DNA (336bp) protein (112aa)
PKHD-type hydroxylase UU9_16436 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
PKHD-type hydroxylase ybiX; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase UU9_16436 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJJ0_9GAMM
SCNpilot_cont_750_bf_scaffold_5418_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1956..4796
DNA (2841bp) protein (947aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase-associated protein RapA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM34_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family rbh
SCNpilot_cont_750_bf_scaffold_5418_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4898..5548)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJI8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87379.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_5418_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5701..6399)
DNA (699bp) protein (233aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ1_9GAMM
cell wall-associated hydrolase, invasion-associated protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_5418_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6501..7244)
DNA (744bp) protein (248aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ2_9GAMM rbh
pyridoxal phosphate enzyme, YggS family rbh
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AGG88265.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_5418_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7366..7908)
DNA (543bp) protein (181aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM29_9GAMM
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EIM00521.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
SCNpilot_cont_750_bf_scaffold_5418_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7869..8720)
DNA (852bp) protein (284aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K1_9GAMM
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EIL94742.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
SCNpilot_cont_750_bf_scaffold_5418_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8939..9277
DNA (339bp) protein (113aa)
Competence protein ComEA-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K0_9GAMM
Competence protein ComEA-like protein {ECO:0000313|EMBL:EIL94741.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
competence protein ComEA-like protein with helix-hairpin-helix repeat region
SCNpilot_cont_750_bf_scaffold_5418_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9361..9840
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88262.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_5418_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9847..10359
DNA (513bp) protein (171aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ6_9GAMM
acetyltransferase, ribosomal protein N-acetylase
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AGG88261.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_5418_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10367..11929)
DNA (1563bp) protein (521aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5J5_9GAMM
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:EIL94736.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sulfite reductase, alpha subunit (flavoprotein)
SCNpilot_cont_750_bf_scaffold_5418_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12307..12489)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XC17_9ALTE
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_5418_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12471..13250)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XC17_9ALTE
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_5418_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13379..14674)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0S6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93067.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_750_bf_scaffold_5418_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14811..14996)
DNA (186bp) protein (62aa)
Type VI secretion ATPase, ClpV1 family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWY6_9GAMM
Type VI secretion ATPase, ClpV1 family protein {ECO:0000313|EMBL:EIL91727.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type VI secretion ATPase; K11907 type VI secretion system protein VasG
SCNpilot_cont_750_bf_scaffold_5418_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16290..17129
DNA (840bp) protein (280aa)
UPI0003D68FC6 related cluster n=1 Tax=unknown RepID=UPI0003D68FC6
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCNpilot_cont_750_bf_scaffold_5418_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17158..18501)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0S4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93065.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K11895 type VI secretion system protein ImpH
Displaying 18 items

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