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SCNpilot_cont_750_bf_scaffold_5726

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_5726_1
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..937
DNA (936bp) protein (312aa)
dehydrogenase/oxidase; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
Putative dehydrogenase/oxidase molybdopterin binding protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SHY1_9BRAD
Putative dehydrogenase/oxidase molybdopterin binding protein {ECO:0000313|EMBL:CCD93808.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
SCNpilot_cont_750_bf_scaffold_5726_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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912..1499
DNA (588bp) protein (196aa)
Lipoprotein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GE98_9BRAD
lipoprotein; K03744 LemA protein
Lipoprotein {ECO:0000313|EMBL:EJZ29293.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_750_bf_scaffold_5726_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1515..2387
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI16_NITHX
hypothetical protein; K06872 uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64131.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_5726_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2390..2887
DNA (498bp) protein (166aa)
membrane protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003458FEC
Membrane protein {ECO:0000313|EMBL:KIZ47415.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5726_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2993..3604)
DNA (612bp) protein (204aa)
Glutathione S-transferase domain n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VIS6_RHOPX rbh
glutathione S-transferase domain-containing protein rbh
Glutathione S-transferase domain {ECO:0000313|EMBL:ADU45503.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_5726_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3875..4822
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI18_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64129.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_5726_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4925..6553
DNA (1629bp) protein (543aa)
Butyryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GUX9_9BRAD
Signal peptide protein {ECO:0000313|EMBL:KJC58685.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5726_8
unknown

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6540..6695
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_5726_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6780..7985)
DNA (1206bp) protein (402aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q7G1_RHOPT rbh
Carnitine dehydratase {ECO:0000313|EMBL:KIZ47412.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
L-carnitine dehydratase/bile acid-inducible protein F rbh
SCNpilot_cont_750_bf_scaffold_5726_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8546..8887
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSW9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36885.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5726_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9092..9292)
DNA (201bp) protein (67aa)
DNA-binding cold-shock protein n=2 Tax=Bradyrhizobiaceae RepID=F7QRR4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36035.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
cspA; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_750_bf_scaffold_5726_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9539..10096)
DNA (558bp) protein (186aa)
adenylate cyclase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000379A954
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49614.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative adenylate cyclase
SCNpilot_cont_750_bf_scaffold_5726_13
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10036..11157)
DNA (1122bp) protein (374aa)
Family 3 adenylate cyclase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YKJ3_9BRAD
Family 3 adenylate cyclase {ECO:0000313|EMBL:EHR05662.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
putative adenylate cyclase
SCNpilot_cont_750_bf_scaffold_5726_14
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11375..12484
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7B5_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL07412.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_5726_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..12903
DNA (423bp) protein (141aa)
Ribosome maturation factor RimP n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFW4_9BRAD
Ribosome maturation factor RimP {ECO:0000313|EMBL:ERF81374.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5726_16
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12936..13877)
DNA (942bp) protein (314aa)
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FC1E61
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49489.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K08990 putative membrane protein
SCNpilot_cont_750_bf_scaffold_5726_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13874..15343)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7R7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36789.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K06918
SCNpilot_cont_750_bf_scaffold_5726_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15626..16321
DNA (696bp) protein (232aa)
Hly-III family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IJ8_RHOP5
DNA-binding protein {ECO:0000313|EMBL:KIZ40895.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Hly-III-like protein; K11068 hemolysin III
SCNpilot_cont_750_bf_scaffold_5726_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16344..17141
DNA (798bp) protein (266aa)
dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DC3808
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49613.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
dehydrogenase
SCNpilot_cont_750_bf_scaffold_5726_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17244..17483)
DNA (240bp) protein (80aa)
biotin sulfoxide reductase; K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3]
Molybdopterin dinucleotide binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJS3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFC74741.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying 20 items

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