ggKbase home page

SCNpilot_cont_750_bf_scaffold_5980

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_5980_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..243
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI39_AFIFE
Response regulator receiver protein {ECO:0000313|EMBL:EFI50116.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
response regulator receiver domain-containing protein
SCNpilot_cont_750_bf_scaffold_5980_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247..1011)
DNA (765bp) protein (255aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
surE; stationary phase survival protein SurE (EC:3.1.3.5 3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] rbh
5'-nucleotidase SurE n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPG1_AFIFE rbh
SCNpilot_cont_750_bf_scaffold_5980_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1016..1606)
DNA (591bp) protein (197aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
serS; serine-tRNA ligase SerS (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NBZ6_AFIFE
SCNpilot_cont_750_bf_scaffold_5980_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1597..2232)
DNA (636bp) protein (212aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NBZ6_AFIFE
SCNpilot_cont_750_bf_scaffold_5980_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2364..3191)
DNA (828bp) protein (276aa)
Sec-independent protein translocase protein TatC n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGJ1_AFIFE rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
tatC; Sec-independent protein translocase protein TatC; K03118 sec-independent protein translocase protein TatC rbh
SCNpilot_cont_750_bf_scaffold_5980_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3188..3622)
DNA (435bp) protein (145aa)
Sec-independent protein translocase protein TatB n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKM7_AFIFE
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB
SCNpilot_cont_750_bf_scaffold_5980_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3680..3922)
DNA (243bp) protein (81aa)
Sec-independent protein translocase protein TatA n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI34_AFIFE
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA
SCNpilot_cont_750_bf_scaffold_5980_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4094..5797)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 PF7_AFIFE">RepID=K8NPF7_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28113.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative cytochrome c biogenesis protein
SCNpilot_cont_750_bf_scaffold_5980_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5901..6758)
DNA (858bp) protein (286aa)
Segregation and condensation protein B n=1 Tax=Afipia felis ATCC 53690 RepID=K8NBZ0_AFIFE rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B rbh
SCNpilot_cont_750_bf_scaffold_5980_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6780..7610)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGI5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28111.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A rbh
SCNpilot_cont_750_bf_scaffold_5980_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7607..8629)
DNA (1023bp) protein (341aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
nagZ; beta-hexosaminidase NagZ (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKM2_AFIFE rbh
SCNpilot_cont_750_bf_scaffold_5980_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8677..9651)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI28_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28109.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_5980_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9593..10153)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI28_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28109.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5980_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10257..11144)
DNA (888bp) protein (296aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
argS; arginine-tRNA ligase ArgS (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPE9_AFIFE
Displaying 14 items

View Taxonomy