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SCNpilot_cont_750_bf_scaffold_3054

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3054_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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32..904
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000380B1E5
Uncharacterized protein {ECO:0000313|EMBL:KIZ40080.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3054_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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870..1352
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI000377E523
cytochrome c, class I
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_750_bf_scaffold_3054_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1384..2010
DNA (627bp) protein (209aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=U5FCC8_9BRAD
Electron transporter SenC {ECO:0000313|EMBL:KIZ40081.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
senC; SCO2-like protein RP587; K07152
SCNpilot_cont_750_bf_scaffold_3054_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2023..2532
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSS9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40082.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein; K09796 hypothetical protein
SCNpilot_cont_750_bf_scaffold_3054_5
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2598..3503
DNA (906bp) protein (302aa)
Cytochrome oxidase assembly factor n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST0_9BRAD rbh
Cytochrome oxidase assembly factor {ECO:0000313|EMBL:EIG62836.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
cytochrome c oxidase assembly protein CtaG/Cox11
SCNpilot_cont_750_bf_scaffold_3054_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3515..3814
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KIZ40083.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_bf_scaffold_3054_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3801..4253
DNA (453bp) protein (151aa)
Protein-disulfide isomerase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40083.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3054_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4285..5022
DNA (738bp) protein (246aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSR6_9RHOB
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KIZ40084.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c biogenesis protein transmembrane region; K06196 cytochrome c-type biogenesis protein
SCNpilot_cont_750_bf_scaffold_3054_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5773..7251
DNA (1479bp) protein (493aa)
V8-like Glu-specific endopeptidase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40085.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3054_10
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7365..8042
DNA (678bp) protein (226aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST7_9BRAD rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIG62843.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
putative methyltransferase
SCNpilot_cont_750_bf_scaffold_3054_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8474..8830
DNA (357bp) protein (119aa)
Antibiotic transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBQ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40086.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_bf_scaffold_3054_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8937..9341
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST9_9BRAD
Conserved exported protein implied in the cusBA heavy metal efflux RND system {ECO:0000313|EMBL:KIZ40087.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3054_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9338..10765
DNA (1428bp) protein (476aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P018_9BRAD rbh
Cation transporter {ECO:0000313|EMBL:KIZ40088.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_750_bf_scaffold_3054_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10762..13518
DNA (2757bp) protein (919aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M5_9BRAD
Cation transporter {ECO:0000313|EMBL:KIZ37577.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
heavy metal efflux pump CzcA
SCNpilot_cont_750_bf_scaffold_3054_15
unknown

Not on your lists

comp(13573..13782)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3054_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13894..14031
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWI8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31770.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_bf_scaffold_3054_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14028..14732
DNA (705bp) protein (235aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFP6_NITHX rbh
Cytochrome C {ECO:0000313|EMBL:KIZ37576.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c, class I; K08738 cytochrome c rbh
SCNpilot_cont_750_bf_scaffold_3054_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15182..15916)
DNA (735bp) protein (245aa)
NADPH-dependent FMN reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI5_NITHX
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KIZ37575.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NADPH-dependent FMN reductase; K11811 arsenical resistance protein ArsH
SCNpilot_cont_750_bf_scaffold_3054_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15894..16127)
DNA (234bp) protein (78aa)
arsC; arsenate reductase ArsC (EC:1.20.4.1)
Arsenate reductase ArsC {ECO:0000313|EMBL:AEI08265.1}; EC=1.20.4.1 {ECO:0000313|EMBL:AEI08265.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Arsenate reductase (Glutaredoxin) n=2 Tax=Oligotropha carboxidovorans RepID=B6JKA1_OLICO
Displaying 19 items

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