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SCNpilot_cont_750_bf_scaffold_3688

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3688_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..217)
DNA (216bp) protein (72aa)
60 kDa chaperonin 3 n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=CH603_BRASO
groEL5; 60kDa chaperonin; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_bf_scaffold_3688_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(403..699)
DNA (297bp) protein (99aa)
10 kDa chaperonin n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDA0_9RHOB
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
groES; co-chaperonin GroES; K04078 chaperonin GroES
SCNpilot_cont_750_bf_scaffold_3688_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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925..1434
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIL8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63929.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3688_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1474..2673
DNA (1200bp) protein (400aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130Z6_RHOPS
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE41343.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_3688_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2702..3466)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIL9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63928.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3688_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3973..4488
DNA (516bp) protein (172aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ11_RHOP2
ErfK/YbiS/YcfS/YnhG protein family {ECO:0000313|EMBL:KIZ42234.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ErfK/YbiS/YcfS/YnhG
SCNpilot_cont_750_bf_scaffold_3688_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4557..5357)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFH8_9BRAD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGT80940.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3688_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5467..6309)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C4D76
Uncharacterized protein {ECO:0000313|EMBL:KGJ63910.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein; K03478 hypothetical protein
SCNpilot_cont_750_bf_scaffold_3688_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6306..7343)
DNA (1038bp) protein (346aa)
Glycosyl transferase, family 2 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ08_RHOP2
Bactoprenol glucosyl transferase {ECO:0000313|EMBL:KIZ42232.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
glycosyl transferase family protein
SCNpilot_cont_750_bf_scaffold_3688_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7428..8408)
DNA (981bp) protein (327aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000255|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000255|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000255|HAMAP-Rule:MF_00079};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
ATP phosphoribosyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=HIS1_RHOPS
SCNpilot_cont_750_bf_scaffold_3688_11
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8405..9574)
DNA (1170bp) protein (390aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HEE7_9BRAD
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:ERF83158.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit
SCNpilot_cont_750_bf_scaffold_3688_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9853..10092)
DNA (240bp) protein (80aa)
TonB-dependent receptor n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTA9_9BRAD
TonB-dependent receptor {ECO:0000313|EMBL:EAQ36529.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
TonB-dependent receptor protein; K02014 iron complex outermembrane recepter protein
Displaying 12 items

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