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SCNpilot_cont_750_bf_scaffold_3716

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3716_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR28_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53517.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3716_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

379..1650
DNA (1272bp) protein (424aa)
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK93_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53518.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
czcC1; putative cobalt-zinc-cadmium resistance outer membrane efflux protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_750_bf_scaffold_3716_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1647..2546
DNA (900bp) protein (300aa)
Membrane fusion protein, putative cation efflux system protein CzcB, RND family n=2 Tax=Oligotropha carboxidovorans RepID=B6JK92_OLICO
czcB1; putative cation efflux system membrane fusion protein CzcB
Membrane fusion protein, putative cation efflux system protein CzcB, RND family {ECO:0000313|EMBL:AEI08274.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2536..2898
DNA (363bp) protein (121aa)
Nitrogen regulatory protein P-II n=2 Tax=Oligotropha carboxidovorans RepID=B6JK91_OLICO
putative nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AEI08275.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2891..6112
DNA (3222bp) protein (1074aa)
Cation efflux system protein CzcA n=2 Tax=Oligotropha carboxidovorans RepID=B6JK90_OLICO rbh
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family rbh
Cation efflux system protein CzcA {ECO:0000313|EMBL:AEI08276.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6109..6585
DNA (477bp) protein (159aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR33_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08277.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6626..8653
DNA (2028bp) protein (676aa)
zntA; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA n=2 Tax=Oligotropha carboxidovorans RepID=F8BR34_OLICM
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA {ECO:0000313|EMBL:AEI08278.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8758..8967
DNA (210bp) protein (70aa)
Type IV pilus assembly PilZ n=2 Tax=Oligotropha carboxidovorans RepID=B6JK86_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08279.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9031..9519
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK85_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08280.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9526..10383
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK84_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08281.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_bf_scaffold_3716_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10385..11284
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCV0_9BRAD rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EKS38569.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
zinc transporter ZitB; K03295 cation efflux system protein, CDF family
SCNpilot_cont_750_bf_scaffold_3716_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11680..12462)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPJ8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61849.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3716_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12512..12925)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRH7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42130.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3716_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12964..13746)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMW2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42129.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3716_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13945..14607
DNA (663bp) protein (221aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPJ9_NITHX
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABE61848.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3716_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14601..15914
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPK0_NITHX rbh
periplasmic sensor signal transduction histidine kinase rbh
SCNpilot_cont_750_bf_scaffold_3716_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16056..16370
DNA (315bp) protein (105aa)
Propeptide PepSY amd peptidase M4 n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEH1_GALCS
Bradyrhizobium elkanii strain UASWS1015 Contig156, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52657.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
propeptide PepSY amd peptidase M4
SCNpilot_cont_750_bf_scaffold_3716_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16844..18106)
DNA (1263bp) protein (421aa)
Cation diffusion facilitator family transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKQ5_9BRAD
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EKS42161.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transmembrane efflux protein
SCNpilot_cont_750_bf_scaffold_3716_19
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18119..18466)
DNA (348bp) protein (116aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM48_NITHX
Putative RND divalent metal cation efflux transporter CnrA {ECO:0000313|EMBL:KGJ71225.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_750_bf_scaffold_3716_20
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18408..20513)
DNA (2106bp) protein (702aa)
RND divalent metal cation efflux transporter CnrA n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH64_BRASB
Putative RND divalent metal cation efflux transporter CnrA {ECO:0000313|EMBL:KGJ71225.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
cnrA; RND divalent metal cation efflux transporter CnrA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_750_bf_scaffold_3716_21
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20480..21214)
DNA (735bp) protein (245aa)
RND divalent metal cation efflux transporter CnrA n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH64_BRASB
cnrA; RND divalent metal cation efflux transporter CnrA; K15726 cobalt-zinc-cadmium resistance protein CzcA
RND divalent metal cation efflux transporter CnrA {ECO:0000313|EMBL:ABQ35508.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_3716_22
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21219..22373)
DNA (1155bp) protein (385aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUV2_9BRAD rbh
Putative secretion protein HlyD {ECO:0000313|EMBL:KGJ71224.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_750_bf_scaffold_3716_23
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22386..22667)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH63_BRASB
Uncharacterized protein {ECO:0000313|EMBL:KGJ71223.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein; K07807 hypothetical protein NreA
SCNpilot_cont_750_bf_scaffold_3716_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23017..23745)
DNA (729bp) protein (243aa)
Trag protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK53_OLICO
virD4; type IV secretion protein VirD4; K03205 type IV secretion system protein VirD4
Type IV secretion protein VirD4 {ECO:0000313|EMBL:AEI08307.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 24 items

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