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SCNpilot_cont_750_bf_scaffold_8826

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_8826_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..961)
DNA (960bp) protein (320aa)
Multi antimicrobial extrusion protein MatE n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J203_RHOP2
Cation transporter {ECO:0000313|EMBL:KIZ48164.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
multi anti extrusion protein MatE
SCNpilot_cont_750_bf_scaffold_8826_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1023..2075)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036FC4C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06430.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_8826_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2098..2877)
DNA (780bp) protein (260aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LN57_9RHIZ
hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_750_bf_scaffold_8826_4
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(3047..4594)
DNA (1548bp) protein (516aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-) rbh
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:BAN00992.1}; EC=6.2.1.- {ECO:0000313|EMBL:BAN00992.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative fatty-acid--CoA ligase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWX0_9ACTN rbh
SCNpilot_cont_750_bf_scaffold_8826_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5133..6245)
DNA (1113bp) protein (371aa)
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:KIZ48167.1}; EC=3.5.4.13 {ECO:0000313|EMBL:KIZ48167.1};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13]
dCTP deaminase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM9_NITHX
SCNpilot_cont_750_bf_scaffold_8826_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6432..7628
DNA (1197bp) protein (399aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
O-succinylhomoserine sulfhydrylase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3W6_9BRAD rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EKS34365.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_8826_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7773..8660)
DNA (888bp) protein (296aa)
Lysophospholipase L1-like esterase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HYX7_9BRAD
GDSL family lipase {ECO:0000313|EMBL:KGT77332.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_8826_8
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8660..9418)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6I0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89807.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
conserved exported hypothetical protein
SCNpilot_cont_750_bf_scaffold_8826_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9415..10686)
DNA (1272bp) protein (424aa)
OpgC protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIL0_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC39273.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative OpgC protein rbh
SCNpilot_cont_750_bf_scaffold_8826_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10950..11342
DNA (393bp) protein (131aa)
Protein ApaG n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CQ3_RHOPS
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
apaG; ApaG protein; K06195 ApaG protein
SCNpilot_cont_750_bf_scaffold_8826_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11476..12486)
DNA (1011bp) protein (337aa)
Hsp33 protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM3_NITHX
hslO; Hsp33-like chaperonin; K04083 molecular chaperone Hsp33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_8826_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12564..12959)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PX55_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL32377.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
3-demethylubiquinone-9 3-methyltransferase
SCNpilot_cont_750_bf_scaffold_8826_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12997..13128)
DNA (132bp) protein (44aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Afipia birgiae RepID=UPI00031F42B2
Displaying 13 items

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