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SCNpilot_cont_750_bf_scaffold_701_23

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 23818..24129

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3-like family protein n=1 Tax=Pseudomonas putida S610 RepID=V6JCB2_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 150
  • Evalue 7.90e-34
Type IV secretory pathway, VirB3-like family protein {ECO:0000313|EMBL:EST17450.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 150
  • Evalue 1.10e-33
trbD; conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 103.0
  • Bit_score: 147
  • Evalue 2.10e-33

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGAGCTGCATAGGGTCCCGATACGGCGCATCGGCAACCGCTCCAATCTTTTCATGGGGGGCGACAGGGAACTGGTGATGCTGGCGGGCCTCATTGCCTTCTCCCTGGTGTTCAATGCCCAGGAATGGCGCGCCGCAATCATCGGCACGGGGTTGTGGGTCGCGGCCCTGTTCCTGCTGCGCTTGATGGCCAAGTCCGATCCGTTGATGCGACCGGTATACCTGCGCCACCGGCGCTACAAGGCCTATTACCCGCCGCGCGCCACGCCCTTCAGGAACAACGGGCGCATCCAGGAGCGGCAATACCGATGA
PROTEIN sequence
Length: 104
MELHRVPIRRIGNRSNLFMGGDRELVMLAGLIAFSLVFNAQEWRAAIIGTGLWVAALFLLRLMAKSDPLMRPVYLRHRRYKAYYPPRATPFRNNGRIQERQYR*