name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_108_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..892)
|
Nodulation protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZZ7_9RHIZ
rbh
Nodulation protein {ECO:0000313|EMBL:ENN84457.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
TolC/NodT family protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_2
unknown
|
Not on your lists |
comp(1132..1350)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_108_3
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1416..1814)
|
Transcriptional regulator protein (Repressor of nodulation genes) n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHR8_AGRRK
nolRch; transcriptional regulator protein (repressor of nodulation genes)
Putative transcriptional regulator {ECO:0000313|EMBL:EJK79845.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
|
|
SCNpilot_cont_750_bf_scaffold_108_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1945..2793
|
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. AP16 RepID=J2KXK0_9RHIZ
rbh
ABC transporter {ECO:0000313|EMBL:KEA08217.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
ABC transporter; K02051 NitT/TauT family transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2795..3931
|
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Rhizobium sp. AP16 RepID=J2DAV6_9RHIZ
rbh
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:GAJ93595.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
|
|
SCNpilot_cont_750_bf_scaffold_108_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3924..4760
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2WAI5_9RHIZ
rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJK79848.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
aliphatic sulphonate ABC transporter; K15554 sulfonate transport system permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4757..5461
|
aliphatic sulphonate ABC transporter; K15555 sulfonate transport system ATP-binding protein [EC:3.6.3.-]
rbh
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000256|HAMAP-Rule:MF_01724}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01724};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Aliphatic sulphonate ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHS2_AGRRK
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5510..6463
|
ABC transporter, substrate-binding protein, aliphatic sulfonates family n=1 Tax=Rhizobium sp. AP16 RepID=J2WB47_9RHIZ
rbh
Aliphatic sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ93598.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
aliphatic sulfonate ABC transporter substrate-binding protein; K15553 sulfonate transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6638..7279)
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7W0_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN88644.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transglutaminase family protein cysteine peptidase BTLCP
|
|
SCNpilot_cont_750_bf_scaffold_108_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7545..9419)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000375DBEE
rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
trkD; KUP family potassium transport system low affinity; K03549 KUP system potassium uptake protein
|
|
SCNpilot_cont_750_bf_scaffold_108_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10118..11773
|
manganese transporter n=1 Tax=Burkholderia thailandensis RepID=UPI00016A9536
rbh
Natural resistance-associated macrophage family protein {ECO:0000313|EMBL:KGS01512.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
manganese/iron transporter
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12394..14244
|
Putative methyl-accepting chemotaxis protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U6F5_9RHIZ
rbh
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ENN88179.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
methyl-accepting chemotaxis protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_13
unknown
|
Not on your lists |
comp(14382..14615)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_108_14
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14898..16289)
|
Aldehyde dehydrogenase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HEF4_9RHIZ
rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EPE97197.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
aldehyde dehydrogenase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_15
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16279..17937)
|
Acetolactate synthase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IDN2_9RHIZ
rbh
Acetolactate synthase {ECO:0000313|EMBL:EPE97198.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
|
|
SCNpilot_cont_750_bf_scaffold_108_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18317..18520
|
Cold-shock protein CspA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWR0_RHITR
cspA1; cold-shock protein CspA
Cold-shock protein CspA {ECO:0000313|EMBL:AGB75682.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_cont_750_bf_scaffold_108_17
unknown
|
Not on your lists |
comp(18700..19245)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_108_18
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19372..19638)
|
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7WT95_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KEA03068.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_108_19
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19786..20499)
|
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2H8E5_BURVI
rbh
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ERJ34463.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20605..21558
|
Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7D9_CAUSK
LysR family transcriptional regulator {ECO:0000313|EMBL:KGM34727.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_750_bf_scaffold_108_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21619..22182
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1F5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84188.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_108_22
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22316..22966
|
Putative glutathione S-transferase I {ECO:0000313|EMBL:CCM74317.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CCM74317.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
Putative glutathione S-transferase I n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PT48_9RHIZ
rbh
|
|
SCNpilot_cont_750_bf_scaffold_108_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23024..23617)
|
Transcriptional regulator, TetR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVG4_RHITR
rbh
transcriptional regulator, TetR family
rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGB74139.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_cont_750_bf_scaffold_108_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23753..24976
|
ABC transporter, membrane spanning protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS75_RHITR
rbh
ABC transporter, membrane spanning protein
rbh
ABC transporter, membrane spanning protein {ECO:0000313|EMBL:AGB74138.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_cont_750_bf_scaffold_108_25
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25027..25584)
|
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I2S3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGE00557.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_108_26
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25713..26801
|
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H5N7_9RHIZ
Luciferase {ECO:0000313|EMBL:KGE00556.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_108_27
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26823..27794)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ET13_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:CCV07150.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
|
|
SCNpilot_cont_750_bf_scaffold_108_28
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27791..28744)
|
UPI0003CDFEE3 related cluster n=1 Tax=unknown RepID=UPI0003CDFEE3
ABC transporter permease {ECO:0000313|EMBL:ESY69162.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
inner-membrane translocator
|
|
SCNpilot_cont_750_bf_scaffold_108_29
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28741..29490)
|
UPI0003CEEF2E related cluster n=1 Tax=unknown RepID=UPI0003CEEF2E
Uncharacterized protein {ECO:0000313|EMBL:ESW87687.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC transporter
|
|
SCNpilot_cont_750_bf_scaffold_108_30
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29483..30220)
|
UPI0003CF9451 related cluster n=1 Tax=unknown RepID=UPI0003CF9451
ABC transporter related protein {ECO:0000313|EMBL:CDX12354.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ABC transporter
|