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SCNpilot_cont_750_bf_scaffold_124

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Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_124_1
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..1671)
DNA (1593bp) protein (531aa)
Transposase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CGU1_RHILT rbh
Transposase {ECO:0000313|EMBL:KJF66386.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
transposase IS66; K07484 transposase rbh
SCNpilot_cont_750_bf_scaffold_124_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1725..2078)
DNA (354bp) protein (118aa)
Putative transposase family protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M825_RHIL3
putative transposase family protein
Putative transposase family protein {ECO:0000313|EMBL:CAK10347.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_750_bf_scaffold_124_3
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2059..2481)
DNA (423bp) protein (141aa)
Putative transposase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K4B7_9RHIZ
Putative transposase {ECO:0000313|EMBL:ELT50686.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
transposase IS3/IS911; K07483 transposase
SCNpilot_cont_750_bf_scaffold_124_4
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2561..2890)
DNA (330bp) protein (110aa)
Transposase n=1 Tax=Nitratireductor indicus C115 RepID=K2PFK8_9RHIZ
Transposase {ECO:0000313|EMBL:AKI03321.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
transposase; K07498 putative transposase
SCNpilot_cont_750_bf_scaffold_124_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2939..3379)
DNA (441bp) protein (147aa)
Transcriptional regulator, AsnC family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V915_9RHIZ
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ENN89681.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator, AsnC family
SCNpilot_cont_750_bf_scaffold_124_6
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3541..6588
DNA (3048bp) protein (1016aa)
dgdA2; 2,2-dialkylglycine decarboxylase DgdA (EC:4.1.1.64) rbh
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3K8U3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EMG51605.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
SCNpilot_cont_750_bf_scaffold_124_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6948..7736
DNA (789bp) protein (263aa)
Extracellular solute-binding protein family 3 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAZ2_9RHIZ rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ENN89684.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_124_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7800..8447
DNA (648bp) protein (216aa)
Amino acid ABC transporter, permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V784_9RHIZ rbh
Amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ENN89685.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease rbh
SCNpilot_cont_750_bf_scaffold_124_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8458..9117
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V919_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN89686.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
patM2; putative amino-acid ABC transporter permease protein PatM rbh
SCNpilot_cont_750_bf_scaffold_124_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9114..9881
DNA (768bp) protein (256aa)
Glutamine ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VF16_9RHIZ rbh
Glutamine ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN89687.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glnQ2; glutamine transport ATP-binding protein GlnQ rbh
SCNpilot_cont_750_bf_scaffold_124_11
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10142..11188)
DNA (1047bp) protein (349aa)
Agmatinase {ECO:0000313|EMBL:CDM60749.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CDM60749.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
agmatinase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E81BD rbh
agmatinase
SCNpilot_cont_750_bf_scaffold_124_12
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11300..11692)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I1J2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDM60748.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_124_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11709..12335)
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H5N8_RHILT rbh
Transcriptional regulator {ECO:0000313|EMBL:EJB05400.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_124_14
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12453..13550
DNA (1098bp) protein (366aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RAJ9_9RHIZ rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EJL49672.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
potD; spermidine/putrescine transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_124_15
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13712..14575
DNA (864bp) protein (288aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000376FA53 rbh
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:EJL49673.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
potB; spermidine/putrescine transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_124_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14575..15366
DNA (792bp) protein (264aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H5X4_RHILT rbh
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJB05403.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
potC; spermidine/putrescine transport system permease protein; K11070 spermidine/putrescine transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_124_17
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..16463
DNA (1101bp) protein (367aa)
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Rhizobium sp. CF122 RepID=J2I1J6_9RHIZ rbh
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EJL49675.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
potA; spermidine/putrescine transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_124_18
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16468..17202
DNA (735bp) protein (245aa)
beta-lactamase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036B536B rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM60742.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
beta-lactamase rbh
SCNpilot_cont_750_bf_scaffold_124_19
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17217..18650
DNA (1434bp) protein (478aa)
Putative Aldehyde dehydrogenase (NAD(+)) {ECO:0000313|EMBL:CCM78516.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CCM78516.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
aldehyde dehydrogenase (NAD+) (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
Putative Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PPH0_9RHIZ rbh
SCNpilot_cont_750_bf_scaffold_124_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19229..19750)
DNA (522bp) protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8K6_9RHIZ
SCNpilot_cont_750_bf_scaffold_124_21
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19849..20190
DNA (342bp) protein (114aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J3CHY2_9RHIZ
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB97357.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
tauC; taurine uptake ABC transporter
SCNpilot_cont_750_bf_scaffold_124_22
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20818..21603
DNA (786bp) protein (262aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2DHU1_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KEA09201.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
transcriptional regulator protein
SCNpilot_cont_750_bf_scaffold_124_23
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21604..23103
DNA (1500bp) protein (500aa)
Dipeptide ABC transporter n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3K9Z7_9RHIZ rbh
Dipeptide ABC transporter {ECO:0000313|EMBL:EMG52010.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
dipeptide ABC transporter; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_124_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23182..24111
DNA (930bp) protein (310aa)
Peptide ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJH6_AGRRK rbh
peptide ABC transporter; K02033 peptide/nickel transport system permease protein rbh
Peptide ABC transporter {ECO:0000313|EMBL:ACM30068.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_750_bf_scaffold_124_25
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24108..24965
DNA (858bp) protein (286aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2CYS6_9RHIZ rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KEA09199.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
dppCch1; dipeptide ABC transporter; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_124_26
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24967..25755
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WI71_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK82410.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_124_27
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25778..26698
DNA (921bp) protein (307aa)
Polysaccharide deacetylase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJH9_AGRRK rbh
Putative hydrolase {ECO:0000313|EMBL:GAJ93065.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
Polysaccharide deacetylase rbh
SCNpilot_cont_750_bf_scaffold_124_28
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26695..28236
DNA (1542bp) protein (514aa)
ggt; gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltransferase n=1 Tax=Rhizobium sp. AP16 RepID=J2DHU5_9RHIZ rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EJK82412.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_750_bf_scaffold_124_29
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28236..29210
DNA (975bp) protein (325aa)
Oligopeptide ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJI1_AGRRK rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEA09195.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
oligopeptide ABC transporter; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_124_30
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29207..30208
DNA (1002bp) protein (334aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. AP16 RepID=J2CYT4_9RHIZ rbh
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJK82414.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
oligopeptide ABC transporter; K02032 peptide/nickel transport system ATP-binding protein rbh
Displaying items 1-30 of 174 in total

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