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SCNpilot_cont_750_bf_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_192_1
unknown

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_192_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244..1932)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8B7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN88819.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein; K09123 hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_192_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..3247)
DNA (1242bp) protein (414aa)
D-amino-acid dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU62_RHITR rbh
D-amino-acid dehydrogenase rbh
D-amino-acid dehydrogenase {ECO:0000313|EMBL:AGB74246.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3247..3969)
DNA (723bp) protein (241aa)
amino acid ABC transporter ATPase/permease; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
Putative ATP-binding protein component of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VCN7_9RHIZ rbh
Putative ATP-binding protein component of ABC transporter {ECO:0000313|EMBL:ENN88817.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_750_bf_scaffold_192_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3962..4615)
DNA (654bp) protein (218aa)
Putative permease of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6M1_9RHIZ rbh
Putative permease of ABC transporter {ECO:0000313|EMBL:ENN88816.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
gltK; amino acid ABC transporter permease rbh
SCNpilot_cont_750_bf_scaffold_192_6
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4627..5292)
DNA (666bp) protein (222aa)
Polar amino acid ABC transporter, inner membrane subunit n=8 Tax=Sinorhizobium RepID=A6UG99_SINMW rbh
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
Putative amino acid ABC transporter permease protein {ECO:0000313|EMBL:AEH84179.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_750_bf_scaffold_192_7
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5362..6168)
DNA (807bp) protein (269aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium radiobacter RepID=UPI00037D7532 rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF71985.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Periplasmic component of amino acid ABC-type transporter/signal transduction system rbh
SCNpilot_cont_750_bf_scaffold_192_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6536..7573
DNA (1038bp) protein (346aa)
Malate/L-lactate dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UF64_9RHIZ rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ENN88813.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
malate/L-lactate dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_192_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7669..8631)
DNA (963bp) protein (321aa)
Dihydrodipicolinate synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVR8_RHITR rbh
dihydrodipicolinate synthase rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AGB74244.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8745..9446)
DNA (702bp) protein (234aa)
FCD domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSF9_RHITR rbh
FCD domain-containing protein rbh
FCD domain-containing protein {ECO:0000313|EMBL:AGB74243.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_11
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9662..11023)
DNA (1362bp) protein (454aa)
Cl-channel voltage-gated family protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CB05_9BURK rbh
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EIM93073.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
Cl-channel, voltage-gated family protein rbh
SCNpilot_cont_750_bf_scaffold_192_12
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11429..12298)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037B8677
Transcriptional regulator {ECO:0000313|EMBL:KJZ26445.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_192_13
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12617..13576
DNA (960bp) protein (320aa)
phosphohydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003694450
Uncharacterized protein {ECO:0000313|EMBL:GAK69041.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
metal dependent phosphohydrolase
SCNpilot_cont_750_bf_scaffold_192_14
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13688..14575
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037B8677
HTH-type transcriptional regulator TrpI {ECO:0000313|EMBL:EEW59991.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_192_15
unknown

Not on your lists

comp(14652..14996)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_192_16
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15507..17360)
DNA (1854bp) protein (618aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Rhizobium sp. CF142 RepID=J1SV18_9RHIZ rbh
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:EJJ29078.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_cont_750_bf_scaffold_192_17
unknown

Not on your lists

17593..17829
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_192_18
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17911..18327
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DF49_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK81422.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_192_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18519..19052)
DNA (534bp) protein (178aa)
Putative DNA topology modulation protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7XC75_SINMM
putative DNA topology modulation protein
Putative DNA topology modulation protein {ECO:0000313|EMBL:AEH81366.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_750_bf_scaffold_192_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19459..19995)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036C847F
Uncharacterized protein {ECO:0000313|EMBL:EJL36288.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_192_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21022..21504
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU58_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74241.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22049..23242
DNA (1194bp) protein (398aa)
Plasmid partitioning protein RepAc1 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8D3_9RHIZ rbh
Plasmid partitioning protein RepAc1 {ECO:0000313|EMBL:ENN86488.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
repA; replication protein A rbh
SCNpilot_cont_750_bf_scaffold_192_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23247..24248
DNA (1002bp) protein (334aa)
Replication protein B n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1H3_9RHIZ rbh
Replication protein B {ECO:0000313|EMBL:ENN86489.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
repB; replication protein B; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_cont_750_bf_scaffold_192_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24405..25700
DNA (1296bp) protein (432aa)
Replication protein C n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXT5_9RHIZ rbh
Replication protein C {ECO:0000313|EMBL:ENN86490.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
repC; replication initiation protein RepC rbh
SCNpilot_cont_750_bf_scaffold_192_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26107..27108)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYW0_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB75329.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_26
unknown

Not on your lists

comp(27505..28146)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_192_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28228..28647)
DNA (420bp) protein (140aa)
Aldehyde-activating protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GYP8_9RHIZ
Glutathione-dependent formaldehyde-activating protein {ECO:0000313|EMBL:CDX18575.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_192_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28854..30176)
DNA (1323bp) protein (441aa)
Flagellar hook protein FlgE n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVK9_RHITR rbh
flagellar hook protein FlgE rbh
Flagellar hook protein FlgE {ECO:0000313|EMBL:AGB75328.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30278..30994)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVQ9_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB75327.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_192_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31166..31795)
DNA (630bp) protein (210aa)
Putative exopolysaccharide synthesis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX89_RHITR rbh
putative exopolysaccharide synthesis protein rbh
Putative exopolysaccharide synthesis protein {ECO:0000313|EMBL:AGB75326.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 105 in total

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