ggKbase home page

SCNpilot_cont_750_bf_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_217_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

630..1526
DNA (897bp) protein (299aa)
Sterol desaturase (EC:1.3.3.-) rbh
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URN0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN84370.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_750_bf_scaffold_217_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1608..1994
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUA7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84371.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_217_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2021..2758
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZQ1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN84372.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein; K09807 hypothetical protein
SCNpilot_cont_750_bf_scaffold_217_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2768..3568
DNA (801bp) protein (267aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
oxacillin hydrolase (class-D beta-lactamase) signal peptide protein (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6]
Putative response regulator n=1 Tax=uncultured bacterium BLR13 RepID=B5L5V7_9BACT
SCNpilot_cont_750_bf_scaffold_217_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3601..3873)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TV85_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84374.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_217_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3870..6998)
DNA (3129bp) protein (1043aa)
Nodulation protein NolG n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URN5_9RHIZ rbh
Nodulation protein NolG {ECO:0000313|EMBL:ENN84375.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
nolG; Nodulation protein nolG rbh
SCNpilot_cont_750_bf_scaffold_217_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7008..8150)
DNA (1143bp) protein (381aa)
NolF secretion protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUB2_9RHIZ rbh
NolF secretion protein {ECO:0000313|EMBL:ENN84376.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
RND family efflux transporter, MFP subunit
SCNpilot_cont_750_bf_scaffold_217_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8288..8917)
DNA (630bp) protein (210aa)
25 kDa outer-membrane immunogenic protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEE9_RHITR rbh
25 kDa outer-membrane immunogenic protein rbh
25 kDa outer-membrane immunogenic protein {ECO:0000313|EMBL:AGB69497.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9194..10531)
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
two component sensor kinase (EC:2.7.1.-) rbh
Signal transduction histidine kinase n=1 Tax=Rhizobium sp. CF142 RepID=J1SJ47_9RHIZ rbh
SCNpilot_cont_750_bf_scaffold_217_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10528..11202)
DNA (675bp) protein (225aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhizobium sp. CF142 RepID=J2KVN1_9RHIZ rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJJ25247.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
two component response regulator rbh
SCNpilot_cont_750_bf_scaffold_217_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11315..12517)
DNA (1203bp) protein (401aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDP5_RHITR rbh
major facilitator superfamily (MFS) transporter rbh
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AGB69498.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12643..14022)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Putative two-component sensor kinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TV92_9RHIZ rbh
two-component sensor kinase
SCNpilot_cont_750_bf_scaffold_217_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14019..14753)
DNA (735bp) protein (245aa)
Putative transcriptional regulatory protein y4xI n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URP1_9RHIZ rbh
Putative transcriptional regulatory protein y4xI {ECO:0000313|EMBL:ENN84380.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
two-component response regulator
SCNpilot_cont_750_bf_scaffold_217_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14837..15475
DNA (639bp) protein (213aa)
Putative phospholipid N-methyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUB7_9RHIZ rbh
Putative phospholipid N-methyltransferase {ECO:0000313|EMBL:ENN84381.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
type 12 methyltransferase
SCNpilot_cont_750_bf_scaffold_217_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15501..16565)
DNA (1065bp) protein (355aa)
Sugar ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA7_RHITR rbh
sugar ABC transporter, ATP-binding protein rbh
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB69499.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16562..17491)
DNA (930bp) protein (310aa)
Carbohydrate kinase n=2 Tax=cellular organisms RepID=L0LHF5_RHITR rbh
carbohydrate kinase rbh
Carbohydrate kinase {ECO:0000313|EMBL:AGB69500.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17492..18508)
DNA (1017bp) protein (339aa)
Sugar isomerase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TV99_9RHIZ rbh
Sugar isomerase {ECO:0000313|EMBL:ENN84384.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_217_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18511..19356)
DNA (846bp) protein (282aa)
Putative carbohydrate ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEF4_RHITR rbh
putative carbohydrate ABC transporter, permease protein rbh
Putative carbohydrate ABC transporter, permease protein {ECO:0000313|EMBL:AGB69502.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19356..20240)
DNA (885bp) protein (295aa)
Putative carbohydrate ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDQ0_RHITR rbh
putative carbohydrate ABC transporter, permease protein rbh
Putative carbohydrate ABC transporter, permease protein {ECO:0000313|EMBL:AGB69503.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20313..21551)
DNA (1239bp) protein (413aa)
Putative carbohydrate ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHB2_RHITR rbh
putative carbohydrate ABC transporter, substrate-binding protein rbh
Putative carbohydrate ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB69504.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21781..22983
DNA (1203bp) protein (401aa)
Putative ROK family transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHG1_RHITR rbh
putative ROK family transcriptional regulator rbh
Putative ROK family transcriptional regulator {ECO:0000313|EMBL:AGB69505.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22980..23321)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFQ0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69506.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23578..24111
DNA (534bp) protein (178aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEF7_RHITR rbh
methylated-DNA--protein-cysteine methyltransferase rbh
SCNpilot_cont_750_bf_scaffold_217_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24206..26209)
DNA (2004bp) protein (668aa)
Putative oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDQ6_RHITR rbh
Putative oxidoreductase {ECO:0000313|EMBL:AGB69508.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
putative oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_217_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26265..27353)
DNA (1089bp) protein (363aa)
Putative carbohydrate ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHB9_RHITR rbh
putative carbohydrate ABC transporter, ATP-binding protein rbh
Putative carbohydrate ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB69509.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27369..28205)
DNA (837bp) protein (279aa)
Binding protein-protein-dependent transport system inner membrane component n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1Y5_9RHIZ rbh
Binding protein-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:ENN84393.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative carbohydrate ABC transporter, permease protein rbh
SCNpilot_cont_750_bf_scaffold_217_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28202..29062)
DNA (861bp) protein (287aa)
Putative component of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TVA9_9RHIZ rbh
Putative component of ABC transporter {ECO:0000313|EMBL:ENN84394.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative carbohydrate ABC transporter, permease protein rbh
SCNpilot_cont_750_bf_scaffold_217_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29238..30512)
DNA (1275bp) protein (425aa)
Putative carbohydrate ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEG1_RHITR rbh
putative carbohydrate ABC transporter, substrate-binding protein rbh
Putative carbohydrate ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB69512.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_217_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30605..31549
DNA (945bp) protein (315aa)
Putative transcriptional regulator protein, AraC family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZS9_9RHIZ rbh
Putative transcriptional regulator protein, AraC family {ECO:0000313|EMBL:ENN84397.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative regulatory protein rbh
SCNpilot_cont_750_bf_scaffold_217_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31613..32383
DNA (771bp) protein (257aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Hydroxypyruvate isomerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHC5_RHITR rbh
hydroxypyruvate isomerase protein rbh
Displaying items 1-30 of 107 in total

View Taxonomy