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SCNpilot_cont_750_bf_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_322_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_322_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

364..615
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMG8_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK87860.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_750_bf_scaffold_322_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

612..1010
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMG7_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAJ93399.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_750_bf_scaffold_322_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1070..2992)
DNA (1923bp) protein (641aa)
Dipeptidyl aminopeptidase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7F3_AZOS1 rbh
dipeptidyl aminopeptidase rbh
Dipeptidyl aminopeptidase {ECO:0000313|EMBL:BAI76582.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_750_bf_scaffold_322_5
unknown

Not on your lists

comp(3043..3249)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_322_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3233..4429)
DNA (1197bp) protein (399aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Rhizobium sp. CF142 RepID=J2B532_9RHIZ rbh
Mandelate racemase {ECO:0000313|EMBL:KGM35590.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_750_bf_scaffold_322_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4439..5194)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAM5_9RHOB rbh
Sugar phosphate isomerase {ECO:0000313|EMBL:KFL31236.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
xylose isomerase domain-containing protein
SCNpilot_cont_750_bf_scaffold_322_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5261..5758)
DNA (498bp) protein (166aa)
Lactoylglutathione lyase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAM4_9RHOB
Lactoylglutathione lyase {ECO:0000313|EMBL:KKC32739.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_322_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5821..7065)
DNA (1245bp) protein (415aa)
sugar ABC transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI000377BC08 rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJC70981.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_322_10
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7078..8178)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAM2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR49730.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_322_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8187..9116)
DNA (930bp) protein (310aa)
sugar ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI000363DFCB rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EJC70979.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_322_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9113..10012)
DNA (900bp) protein (300aa)
Permease component of ABC-type sugar transporter n=2 Tax=Rhizobium leguminosarum RepID=J0VDY7_RHILV rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJC70978.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_322_13
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10146..10952
DNA (807bp) protein (269aa)
dkgB; 2,5-diketo-D-gluconate reductase B (EC:1.1.1.274); K06222 2,5-diketo-D-gluconate reductase B [EC:1.1.1.274]
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Rhizobium sp. CF142 RepID=J1TI15_9RHIZ rbh
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:EJJ31571.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_750_bf_scaffold_322_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11050..11490
DNA (441bp) protein (147aa)
hypothetical protein; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase family protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VCF7_RHILV
Lactoylglutathione lyase {ECO:0000313|EMBL:KKB11323.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_750_bf_scaffold_322_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11507..12532
DNA (1026bp) protein (342aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BWQ7_RHILV rbh
Transcriptional regulator {ECO:0000313|EMBL:KFL31244.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_322_16
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12552..13463)
DNA (912bp) protein (304aa)
Periplasmic component of the Tol biopolymer transport system n=1 Tax=Rhizobium sp. CF142 RepID=J2B603_9RHIZ rbh
Periplasmic component of the Tol biopolymer transport system {ECO:0000313|EMBL:EJJ31505.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_322_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13636..15285)
DNA (1650bp) protein (550aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z266_9RHIZ rbh
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EIM30308.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Choline dehydrogenase and related flavoproteins
SCNpilot_cont_750_bf_scaffold_322_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15282..15722)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z267_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM30309.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_750_bf_scaffold_322_19
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15744..16589)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035D61E1 rbh
ABC transporter permease {ECO:0000313|EMBL:KHL03556.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
putative sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_322_20
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16599..17531)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003797063 rbh
Transporter {ECO:0000313|EMBL:KIC68939.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_322_21
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17533..18828)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036A8D2C rbh
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK01976.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_cont_750_bf_scaffold_322_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18888..19649)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037CAE05
Xylose isomerase {ECO:0000313|EMBL:KGM32752.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
xylose isomerase
SCNpilot_cont_750_bf_scaffold_322_23
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19803..20843
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037F8C32 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM32757.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
transcriptional (co)regulator CytR; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
SCNpilot_cont_750_bf_scaffold_322_24
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21039..22139)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5F1_AGRVS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM40099.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_750_bf_scaffold_322_25
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22341..23618
DNA (1278bp) protein (426aa)
Putative ABC-type sugar transport system,periplasmic component n=1 Tax=Vibrio nigripulchritudo SFn118 RepID=U4GB58_9VIBR rbh
Putative ABC-type sugar transport system,periplasmic component {ECO:0000313|EMBL:CCN40650.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FTn2.;"
putative ABC-type sugar transport system, periplasmic component rbh
SCNpilot_cont_750_bf_scaffold_322_26
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23696..24568
DNA (873bp) protein (291aa)
hypothetical protein; K03335 inosose dehydratase [EC:4.2.1.44] rbh
Putative uncharacterized protein n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QHV9_GLUHA rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ27906.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
SCNpilot_cont_750_bf_scaffold_322_27
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24615..25409
DNA (795bp) protein (265aa)
nagB; glucosamine-6-phosphate isomerase (EC:3.5.99.6)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI0003794FBB
Uncharacterized protein {ECO:0000313|EMBL:AJR06491.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola Gung47.;"
SCNpilot_cont_750_bf_scaffold_322_28
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25406..26392
DNA (987bp) protein (329aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
Putative glucokinase n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QHV8_GLUHA rbh
Putative glucokinase {ECO:0000313|EMBL:EFG83433.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
SCNpilot_cont_750_bf_scaffold_322_29
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26389..27288
DNA (900bp) protein (300aa)
Trehalose transport system permease protein SugA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW86_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AJR06486.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola Gung47.;"
putative ABC-type sugar transport system, permease component
SCNpilot_cont_750_bf_scaffold_322_30
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27297..28118
DNA (822bp) protein (274aa)
Putative ABC-type sugar transport system,permease component n=3 Tax=Vibrio nigripulchritudo RepID=U4EBL3_9VIBR rbh
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:AJR06485.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola Gung47.;"
putative ABC-type sugar transport system, permease component rbh
Displaying items 1-30 of 69 in total

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