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SCNpilot_cont_750_bf_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_479_1
unknown

Not on your lists

3..236
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_479_2
unknown

Not on your lists

375..473
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_479_3
unknown

Not on your lists

1717..1929
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_479_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2282..2956
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003657832
response regulator receiver protein; K07782 LuxR family transcriptional regulator
Response regulator receiver protein {ECO:0000313|EMBL:ABN78495.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_cont_750_bf_scaffold_479_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3303..5078)
DNA (1776bp) protein (592aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VAN0_9RHIZ rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ENN88097.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
mcpA; methyl-accepting chemotaxis protein rbh
SCNpilot_cont_750_bf_scaffold_479_6
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5505..6101)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003657832
response regulator receiver protein; K07782 LuxR family transcriptional regulator
Response regulator receiver protein {ECO:0000313|EMBL:ABN78495.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_cont_750_bf_scaffold_479_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6456..8282
DNA (1827bp) protein (609aa)
Diguanylate cyclase n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYS1_KETVY rbh
Chemotaxis protein {ECO:0000313|EMBL:EXL09938.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
diguanylate cyclase rbh
SCNpilot_cont_750_bf_scaffold_479_8
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8601..9254
DNA (654bp) protein (218aa)
Rifampin ADP-ribosyl transferase n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2VJ94_9NOCA
Ribosomal subunit interface protein {ECO:0000313|EMBL:KJF73495.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
arr; rifampin ADP-ribosyl transferase
SCNpilot_cont_750_bf_scaffold_479_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9689..10498
DNA (810bp) protein (270aa)
Poly(3-hydroxybutyrate) depolymerase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BC52_RHILV rbh
Poly(3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:EJC63465.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
polyhydroxybutyrate depolymerase; K03932 polyhydroxybutyrate depolymerase
SCNpilot_cont_750_bf_scaffold_479_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10552..11178
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036DA316
Uncharacterized protein {ECO:0000313|EMBL:AHF88606.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_cont_750_bf_scaffold_479_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11280..11747
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035DE32F
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:EJC63468.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
YHS domain-containing protein
SCNpilot_cont_750_bf_scaffold_479_12
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12080..13291)
DNA (1212bp) protein (404aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0JI14_RHILV rbh
CAIB/BAIF family protein {ECO:0000313|EMBL:CDN56772.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_750_bf_scaffold_479_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13299..14402)
DNA (1104bp) protein (368aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000380B139 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC63470.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
opgC; hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_479_14
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14428..16056)
DNA (1629bp) protein (543aa)
alsS; acetolactate synthase; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036ED8B4 rbh
Acetolactate synthase, catabolic {ECO:0000313|EMBL:CDN56770.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_750_bf_scaffold_479_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16356..16631)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D6F67
Uncharacterized protein {ECO:0000313|EMBL:CDN56769.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_479_16
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16661..17989)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035CB6BE rbh
Tetratricopeptide repeat protein 38 {ECO:0000313|EMBL:CDN56768.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_479_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18234..18947
DNA (714bp) protein (238aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Rhizobium leguminosarum RepID=UPI000360C8E5 rbh
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EJC63474.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_750_bf_scaffold_479_18
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18955..19170
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036B8A0D
Uncharacterized protein {ECO:0000313|EMBL:CDN56766.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_479_19
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19172..19333
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003678D72
Uncharacterized protein {ECO:0000313|EMBL:CDN56765.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_750_bf_scaffold_479_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19372..20427
DNA (1056bp) protein (352aa)
(2Fe-2S)-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037CA7E0 rbh
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EJC63477.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
Rieske (2Fe-2S) protein rbh
SCNpilot_cont_750_bf_scaffold_479_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20427..21197
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000364A34E rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF88622.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_479_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21194..21403
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000374ED20
Uncharacterized protein {ECO:0000313|EMBL:AHF88623.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_cont_750_bf_scaffold_479_23
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21512..21931
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037E2654
Putative membrane protein UPF0093 signal peptide {ECO:0000313|EMBL:CCD87653.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_479_24
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

22044..22697
DNA (654bp) protein (218aa)
Bacterioferritin comigratory protein, putative n=1 Tax=Ricinus communis RepID=B9TFG1_RICCO
bacterioferritin comigratory protein, putative
Bacterioferritin comigratory protein, putative {ECO:0000313|EMBL:EEF25404.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_cont_750_bf_scaffold_479_25
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22773..23483
DNA (711bp) protein (237aa)
glutathione S-transferase domain; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TCU3_BURPP
Glutathione S-transferase domain {ECO:0000313|EMBL:ACD19517.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_750_bf_scaffold_479_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23672..24370)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036B6F29 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN86814.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_479_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24578..25324
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036418B2 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_479_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25498..26112
DNA (615bp) protein (205aa)
TetR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E7D10 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AHF88624.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_479_29
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26225..26782
DNA (558bp) protein (186aa)
RNA polymerase sigma70 n=1 Tax=Rhizobium leguminosarum RepID=UPI000367CF62 rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:KGD96497.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
RNA polymerase ECF-type sigma 70 factor
SCNpilot_cont_750_bf_scaffold_479_30
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26779..27414
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000373B95B
Uncharacterized protein {ECO:0000313|EMBL:EJC63482.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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