name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_489_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..625)
|
Putative epimerase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4N3_9RHIZ
Putative epimerase {ECO:0000313|EMBL:ENN87559.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
galactonate dehydratase protein
|
|
SCNpilot_cont_750_bf_scaffold_489_2
unknown
|
Not on your lists |
645..1274
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_489_3
unknown
|
Not on your lists |
1686..2306
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_489_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2313..3203)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003638F24
rbh
Aldose 1-epimerase
rbh
Aldose 1-epimerase {ECO:0000313|EMBL:ACS61001.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
|
|
SCNpilot_cont_750_bf_scaffold_489_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3212..4216)
|
sugar ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003700CEF
rbh
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AJD44294.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_6
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4228..5757)
|
heme ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035CD53E
rbh
ABC transporter {ECO:0000313|EMBL:EPE94217.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
|
|
SCNpilot_cont_750_bf_scaffold_489_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5830..6810)
|
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037CD16D
rbh
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein
rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACS61004.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
|
|
SCNpilot_cont_750_bf_scaffold_489_8
unknown
|
Not on your lists |
comp(6825..7004)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_489_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7106..7879
|
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037794C0
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EPE94219.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
GntR family transcriptional regulator
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_10
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7982..9262)
|
LolC/E family lipoprotein releasing system, transmembrane protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C214_9RHIZ
LolC/E family lipoprotein releasing system, transmembrane protein {ECO:0000313|EMBL:EIM75866.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein
|
|
SCNpilot_cont_750_bf_scaffold_489_11
unknown
|
Not on your lists |
comp(9259..9576)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_489_12
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9763..10332)
|
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002D32D72
phenylacrylic acid decarboxylase
|
|
SCNpilot_cont_750_bf_scaffold_489_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10344..11717)
|
4-hydroxybenzoate decarboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW63_RHITR
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:KJC56900.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
4-hydroxybenzoate decarboxylase
|
|
SCNpilot_cont_750_bf_scaffold_489_14
uncultured bacterium, Bacteria
|
Not on your lists |
comp(11727..13241)
|
Histidine ammonia-lyase {ECO:0000313|EMBL:EKD61627.1}; EC=4.3.1.3 {ECO:0000313|EMBL:EKD61627.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3]
Histidine ammonia-lyase n=1 Tax=uncultured bacterium RepID=K2AJ08_9BACT
|
|
SCNpilot_cont_750_bf_scaffold_489_15
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13335..14582
|
Transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2H2_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AHI24033.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
transcriptional regulator, LysR family
|
|
SCNpilot_cont_750_bf_scaffold_489_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14796..16412
|
Alcohol dehydrogenase {ECO:0000313|EMBL:EYR81282.1}; EC=1.1.99.- {ECO:0000313|EMBL:EYR81282.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alcohol dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ64_9RHIZ
rbh
GMC family oxidoreductase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16446..17948)
|
Transcriptional regulator, GntR family with aminotransferase domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5V3_9RHIZ
rbh
Putative rhizopine catabolism regulatory protein MocR {ECO:0000313|EMBL:EYR81283.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator/MocR family aminotransferase
|
|
SCNpilot_cont_750_bf_scaffold_489_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18130..19236
|
Mandelate racemase/muconate lactonizing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWN0_9RHIZ
rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EYR81284.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
racemase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19238..20728
|
Aldehyde dehydrogenase {ECO:0000313|EMBL:EYR81285.1}; EC=1.2.99.3 {ECO:0000313|EMBL:EYR81285.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
rbh
Aldehyde dehydrogenase family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXN1_9RHOB
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20899..21978
|
Spermidine/putrescine-binding periplasmic protein 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXM8_9RHIZ
rbh
Spermidine/putrescine-binding periplasmic protein 2 {ECO:0000313|EMBL:EYR81286.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine-binding, periplasmic protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22146..23219
|
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:EYR81287.1}; EC=3.6.3.31 {ECO:0000313|EMBL:EYR81287.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine transport system, ATP-binding protein (EC:3.6.3.31)
rbh
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGJ7_9RHIZ
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23225..24094
|
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWM9_9RHIZ
rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:EYR81288.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine transport system, permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24097..24963
|
ABC-type transporter, integral membrane subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5I9_9RHIZ
rbh
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:EYR81289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine transport system, permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25210..26526)
|
Aminotransferase class-III n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXY4_9RHIZ
rbh
Aminotransferase class-III {ECO:0000313|EMBL:ENN86525.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
aminotransferase class-III
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_25
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26523..27344)
|
N-formylglutamate amidohydrolase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7I4_OCHA4
rbh
N-formylglutamate amidohydrolase
rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ABS17188.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
|
|
SCNpilot_cont_750_bf_scaffold_489_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27359..28705)
|
Glutamine synthetase catalytic region n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V669_9RHIZ
rbh
Glutamine synthetase catalytic region {ECO:0000313|EMBL:ENN86527.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
|
|
SCNpilot_cont_750_bf_scaffold_489_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28751..29413)
|
Isochorismatase hydrolase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8H9_9RHIZ
rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ENN86528.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
isochorismatase hydrolase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29459..30340)
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1L9_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN86529.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
RpiR family transcriptional regulator
rbh
|
|
SCNpilot_cont_750_bf_scaffold_489_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30509..32389
|
ABC transporter related protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXZ2_9RHIZ
rbh
ABC transporter related protein {ECO:0000313|EMBL:ENN86530.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
|
|
SCNpilot_cont_750_bf_scaffold_489_30
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32411..33565
|
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0M8_9RHIZ
rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ENN86531.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
rbh
|