name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_759_1
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
185..3160
|
Transposase Tn3 family protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LFI0_AGRSH
rbh
transposase Tn3 family protein
rbh
Transposase Tn3 family protein {ECO:0000313|EMBL:ADY67812.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
|
|
SCNpilot_cont_750_bf_scaffold_759_2
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3100..3771)
|
Putative short-chain dehydrogenase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PRZ1_9RHIZ
Putative short-chain dehydrogenase {ECO:0000313|EMBL:CCM79501.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
short-chain dehydrogenase/reductase SDR; K07124
|
|
SCNpilot_cont_750_bf_scaffold_759_3
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3886..4869)
|
Putative oxidoreductase, Zn-dependent and NAD(P)-binding n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q3P1_9RHIZ
rbh
Putative oxidoreductase, Zn-dependent and NAD(P)-binding {ECO:0000313|EMBL:CCM79500.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
zinc-binding alcohol dehydrogenase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_4
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5044..5385
|
Uncharacterized HTH-type transcriptional regulator ydeP n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q6A1_9RHIZ
Uncharacterized HTH-type transcriptional regulator ydeP {ECO:0000313|EMBL:CCM79499.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
transcriptional regulator
|
|
SCNpilot_cont_750_bf_scaffold_759_5
unknown
|
Not on your lists |
comp(5378..5482)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_759_6
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5512..6186)
|
Transcriptional regulator TetR family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P8_AGRVS
rbh
TetR family transcriptional regulator
rbh
Transcriptional regulator TetR family {ECO:0000313|EMBL:ACM40196.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
SCNpilot_cont_750_bf_scaffold_759_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6570..7763
|
ABC transporter nucleotide binding/ATPase protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P7_AGRVS
rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAJ97090.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
ABC transporter ATPase; K02023 multiple sugar transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7747..8667
|
ABC transporter n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P6_AGRVS
rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAJ97089.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
ABC transporter; K02025 multiple sugar transport system permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8667..9494
|
ABC transporter membrane spanning protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P5_AGRVS
rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAJ97088.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9565..10836
|
ABC transporter substrate binding protein (Sugar) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P4_AGRVS
rbh
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ97087.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
ABC transporter substrate binding protein (sugar); K02027 multiple sugar transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_11
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10961..11791
|
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P3_AGRVS
rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ97086.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_12
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11927..12802
|
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P2_AGRVS
rbh
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:GAJ97085.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
|
|
SCNpilot_cont_750_bf_scaffold_759_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12805..13341
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037884F8
Putative acetyltransferase {ECO:0000313|EMBL:GAJ97084.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
acetyltransferase
|
|
SCNpilot_cont_750_bf_scaffold_759_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14365..15624
|
Reverse transcriptase/maturase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJR5_AGRRK
rbh
reverse transcriptase/maturase
rbh
Reverse transcriptase/maturase protein {ECO:0000313|EMBL:ACM30157.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
|
SCNpilot_cont_750_bf_scaffold_759_15
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15657..16151
|
Transposase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7K7_9RHIZ
Transposase {ECO:0000313|EMBL:EDQ33097.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
transposase; K07498 putative transposase
|
|
SCNpilot_cont_750_bf_scaffold_759_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16491..17885)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
two component sensor kinase (EC:2.7.3.-)
rbh
histidine kinase n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003635C30
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17882..18544)
|
transcriptional regulator n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003675A47
rbh
DNA-binding response regulator {ECO:0000313|EMBL:AHK04468.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
two component response regulator
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_18
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18675..19190
|
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LDQ4_AGRSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY65866.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
|
|
SCNpilot_cont_750_bf_scaffold_759_19
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19547..20680
|
Putative RND efflux transporter, MFP subunit n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LR42_RHITR
rbh
Multidrug resistance protein MdtA {ECO:0000313|EMBL:GAK72116.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
putative RND efflux transporter, MFP subunit
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_20
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20677..23832
|
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSS5_RHITR
rbh
Multidrug resistance protein MdtB {ECO:0000313|EMBL:GAK72115.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
resistance nodulation cell division (RND) drug efflux pump, inner membrane component
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23889..25145
|
Arsenical pump membrane protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UDB3_9RHIZ
rbh
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
arsB; arsenical efflux pump protein ArsB
|
|
SCNpilot_cont_750_bf_scaffold_759_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25474..26676)
|
GGDEF domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVV0_RHITR
rbh
GGDEF domain-containing protein
rbh
GGDEF domain-containing protein {ECO:0000313|EMBL:AGB75367.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_cont_750_bf_scaffold_759_23
unknown
|
Not on your lists |
comp(27365..27580)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_759_24
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27696..28085)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DIN2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJT01549.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
hypothetical protein; K06893
|
|
SCNpilot_cont_750_bf_scaffold_759_25
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28108..28752)
|
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5M9W6_9RHIZ
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:EJT01550.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
coenzyme F420-dependent NADP oxidoreductase; K06988
|
|
SCNpilot_cont_750_bf_scaffold_759_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28784..29536)
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KGZ5_RHILT
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC76474.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
glucose dehydrogenase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_27
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29587..30321)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DFI8_9RHIZ
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJT01551.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
glucose dehydrogenase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30547..31443
|
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WGN9_RHILT
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJC84598.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_750_bf_scaffold_759_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31781..33568)
|
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000368A12A
rbh
PAS domain S-box {ECO:0000313|EMBL:EJC63931.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
mcpA; putative methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_759_30
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34277..35254)
|
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
rbh
Exonuclease RNase T and DNA polymerase III n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BXR0_SINMB
rbh
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AEG06790.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
|