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SCNpilot_cont_750_bf_scaffold_864

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_864_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..271)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036E5290
Uncharacterized protein {ECO:0000313|EMBL:CDX21057.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_864_2
unknown

Not on your lists

331..780
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_864_3
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1002..2558
DNA (1557bp) protein (519aa)
Recombinase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1D9_9BRAD
Recombinase {ECO:0000313|EMBL:AJE45648.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
Resolvase domain
SCNpilot_cont_750_bf_scaffold_864_4
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2721..3689
DNA (969bp) protein (323aa)
Transferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWS7_RHOCS
Glutathionyl-hydroquinone reductase YqjG {ECO:0000313|EMBL:KIE10101.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
transferase; K07393 putative glutathione S-transferase
SCNpilot_cont_750_bf_scaffold_864_5
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3717..4583)
DNA (867bp) protein (289aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WQX6_9BURK rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDZ99225.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_864_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4709..6154
DNA (1446bp) protein (482aa)
Drug:H+ antiporter-2(DHA2) family drug resistance MFS transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEX2_9BRAD
Drug:H+ antiporter-2(DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:ERF80989.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator superfamily drug efflux transporter rbh
SCNpilot_cont_750_bf_scaffold_864_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6243..7718
DNA (1476bp) protein (492aa)
Drug:H+ antiporter-2(DHA2) family drug resistance MFS transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEX2_9BRAD rbh
Drug:H+ antiporter-2(DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:ERF80989.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator transporter rbh
SCNpilot_cont_750_bf_scaffold_864_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8174..9103
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30469.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_864_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9067..9327)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031D8F73
Uncharacterized protein {ECO:0000313|EMBL:BAR58878.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_864_10
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9324..10532)
DNA (1209bp) protein (403aa)
Conjugation TrbI family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT7_GLUDA
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI52565.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_864_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10529..11602)
DNA (1074bp) protein (358aa)
P-type conjugative transfer protein TrbG n=2 Tax=Afipia RepID=D6V0W5_9BRAD
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EKS30466.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_cont_750_bf_scaffold_864_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11599..12282)
DNA (684bp) protein (228aa)
Conjugal transfer protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QW17_METTR rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:BAR58875.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
trbF; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
SCNpilot_cont_750_bf_scaffold_864_13
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12286..13599)
DNA (1314bp) protein (438aa)
P-type conjugative transfer protein TrbL n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT4_GLUDA
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ACI52562.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_864_14
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13596..13916)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT3_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI52561.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_864_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13928..14665)
DNA (738bp) protein (246aa)
P-type conjugative transfer protein TrbJ n=2 Tax=Afipia RepID=D6V0X0_9BRAD
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EKS30462.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer protein TrbJ
SCNpilot_cont_750_bf_scaffold_864_16
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..17100)
DNA (2439bp) protein (813aa)
AAA ATPase n=2 Tax=Afipia RepID=D6V0X1_9BRAD
AAA ATPase {ECO:0000313|EMBL:ACI52559.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
SCNpilot_cont_750_bf_scaffold_864_17
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17108..17383)
DNA (276bp) protein (92aa)
conjugal transfer protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003636DCF
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3
Type IV secretory pathway VirB3 family protein {ECO:0000313|EMBL:ACI52558.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_864_18
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17383..17715)
DNA (333bp) protein (111aa)
Conjugal transfer protein TrbC n=2 Tax=Rhodospirillum rubrum RepID=G2TBQ5_RHORU
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ABC21611.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_750_bf_scaffold_864_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17712..19154)
DNA (1443bp) protein (481aa)
P-type conjugative transfer ATPase TrbB n=2 Tax=Afipia RepID=D6V0X4_9BRAD rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EFI53354.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
trbB; conjugal transfer protein; K03196 type IV secretion system protein VirB11 rbh
SCNpilot_cont_750_bf_scaffold_864_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19890..20831)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP07_RHOPX rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42453.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_864_21
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20828..21130)
DNA (303bp) protein (101aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
twitching motility protein PilT n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003170F88
stbB; Plasmid stability protein StbB, putative; K07062
SCNpilot_cont_750_bf_scaffold_864_22
unknown

Not on your lists

21555..22055
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_864_23
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22052..23989
DNA (1938bp) protein (646aa)
Resolvase domain n=2 Tax=Acetobacteraceae RepID=B5ZG42_GLUDA rbh
Resolvase domain rbh
Resolvase domain {ECO:0000313|EMBL:ACI50844.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_864_24
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24089..24541
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WCW7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK80658.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_750_bf_scaffold_864_25
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24542..24805
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ12579.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
SCNpilot_cont_750_bf_scaffold_864_26
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24809..25489
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VHT4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGJ01957.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
SCNpilot_cont_750_bf_scaffold_864_27
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25486..25698)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q6L0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM80044.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
SCNpilot_cont_750_bf_scaffold_864_28
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26260..27162
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FD8DE
Uncharacterized protein {ECO:0000313|EMBL:KFG67136.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Putative restriction endonuclease
SCNpilot_cont_750_bf_scaffold_864_29
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27543..28409
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J3T0_PSEUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK76725.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_cont_750_bf_scaffold_864_30
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28406..29902
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FKN5_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT01878.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
hypothetical protein rbh
Displaying items 1-30 of 35 in total

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