ggKbase home page

SCNpilot_cont_750_bf_scaffold_402

Search features with annotation key words

Displaying items 1-30 of 73 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_402_1
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48..563)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8D8
Uncharacterized protein {ECO:0000313|EMBL:KJL26398.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_2
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(661..1176)
DNA (516bp) protein (172aa)
single-stranded DNA-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B669CC
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KJL26399.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
single-stranded DNA-binding protein
SCNpilot_cont_750_bf_scaffold_402_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1268..3031)
DNA (1764bp) protein (588aa)
type VI secretion protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3039F
TraM recognition site of TraD and TraG {ECO:0000313|EMBL:KJL34505.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3156..4172)
DNA (1017bp) protein (339aa)
Putative smf family protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSN7_ARTAR
DNA-binding protein {ECO:0000313|EMBL:KDA06156.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
smf family protein; K04096 DNA processing protein
SCNpilot_cont_750_bf_scaffold_402_5
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4331..4921
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B61948
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ20003.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_750_bf_scaffold_402_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4915..5385
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035D9B3B
Uncharacterized protein {ECO:0000313|EMBL:EOD64365.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_7
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5472..6104)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B4BDF7
Uncharacterized protein {ECO:0000313|EMBL:KJQ55403.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
SCNpilot_cont_750_bf_scaffold_402_8
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6486..7568
DNA (1083bp) protein (361aa)
Phage integrase family protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GCE1_9ACTO rbh
Phage integrase family protein {ECO:0000313|EMBL:EGX58830.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
phage integrase family protein rbh
SCNpilot_cont_750_bf_scaffold_402_9
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7594..7902
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GCE2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGX58831.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_10
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7899..9695
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Arthrobacter aurescens (strain TC1) RepID=A1RCE4_ARTAT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM10494.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;"
SCNpilot_cont_750_bf_scaffold_402_11
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9755..11245)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSK6_ARTAR
Uncharacterized protein {ECO:0000313|EMBL:CEI48396.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11297..12751)
DNA (1455bp) protein (485aa)
membrane protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8D2 rbh
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EXJ52177.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_cont_750_bf_scaffold_402_13
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12944..14368)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8D1 rbh
hypothetical protein rbh
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CBT74614.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
SCNpilot_cont_750_bf_scaffold_402_14
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14399..14716)
DNA (318bp) protein (106aa)
membrane protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS29591.1}; TaxID=465515 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC; 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus; lysodeikticus).;"
SCNpilot_cont_750_bf_scaffold_402_15
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14953..15756)
DNA (804bp) protein (268aa)
LuxR family transcriptional regulator n=1 Tax=Actinomyces timonensis RepID=UPI00036515CD
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGM12481.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
chemotaxis protein CheY
SCNpilot_cont_750_bf_scaffold_402_16
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15753..17228)
DNA (1476bp) protein (492aa)
Histidine kinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0C5_BEUC1
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACQ79311.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_750_bf_scaffold_402_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17183..18028)
DNA (846bp) protein (282aa)
Putative ABC transporter transmembrane protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2J9_CELFA
putative ABC transporter transmembrane protein
Putative ABC transporter transmembrane protein {ECO:0000313|EMBL:AEE45225.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_750_bf_scaffold_402_18
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18025..19008)
DNA (984bp) protein (328aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Microbacteriaceae RepID=UPI0003670A92
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR63379.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
putative multidrug ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_402_19
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19243..19848)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI0003482C3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42148.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_402_20
unknown

Not on your lists

comp(19943..20245)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_402_21
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20378..21301)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036A1DFE
Uncharacterized protein {ECO:0000313|EMBL:KJK48698.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
putative lactone biosynthesis protein
SCNpilot_cont_750_bf_scaffold_402_22
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21358..22008
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) RepID=C7R5A8_JONDD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACV07786.1}; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134); (Listeria denitrificans).;"
SCNpilot_cont_750_bf_scaffold_402_23
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22108..23031
DNA (924bp) protein (308aa)
epimerase n=1 Tax=Rhodococcus opacus RepID=UPI00029CD047
NAD-dependent epimerase/dehydratase family protein, 3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:ELB92030.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_750_bf_scaffold_402_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23148..23450)
DNA (303bp) protein (101aa)
membrane protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8CF
Uncharacterized protein {ECO:0000313|EMBL:CDJ99381.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_25
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23558..24721)
DNA (1164bp) protein (388aa)
peptidase M23 n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8CE rbh
M23/M37 family peptidase {ECO:0000313|EMBL:CEI48387.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
metalloendopeptidase-like membrane protein
SCNpilot_cont_750_bf_scaffold_402_26
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24737..25417)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8CD
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_cont_750_bf_scaffold_402_27
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25486..26574)
DNA (1089bp) protein (363aa)
ParB-like protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8CB
Chromosome partitioning protein ParB {ECO:0000313|EMBL:EYT55048.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_750_bf_scaffold_402_28
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26571..27410)
DNA (840bp) protein (280aa)
Exopolyphosphatase {ECO:0000313|EMBL:CEG94507.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CEG94507.1};; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8CA rbh
hypothetical protein
SCNpilot_cont_750_bf_scaffold_402_29
unknown

Not on your lists

comp(27655..28035)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8C9
SCNpilot_cont_750_bf_scaffold_402_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28032..28748)
DNA (717bp) protein (239aa)
phage excisionase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A8C8
Uncharacterized protein {ECO:0000313|EMBL:KJL29685.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phage excisionase
Displaying items 1-30 of 73 in total

View Taxonomy