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SCNpilot_cont_750_bf_scaffold_481

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Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_481_1
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)
Integrase core domain protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1K7_9MYCO
Integrase core domain protein {ECO:0000313|EMBL:EFG80042.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
transposase
SCNpilot_cont_750_bf_scaffold_481_2
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

510..740
DNA (231bp) protein (77aa)
Transposase IS3/IS911 family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0J0_CELGA
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AEI12675.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_750_bf_scaffold_481_3
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

868..1545
DNA (678bp) protein (226aa)
Integrase catalytic region n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3J5_CELGA
Integrase {ECO:0000313|EMBL:KGM08441.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Integrase catalytic region
SCNpilot_cont_750_bf_scaffold_481_4
unknown

Not on your lists

comp(1555..1797)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_481_5
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1922..2851)
DNA (930bp) protein (310aa)
fructokinase (EC:2.7.1.4); K00847 fructokinase [EC:2.7.1.4]
Ribokinase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIX5_9ACTO
Ribokinase {ECO:0000313|EMBL:KGM15870.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
SCNpilot_cont_750_bf_scaffold_481_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2848..3846)
DNA (999bp) protein (333aa)
Putative LacI family transcriptional regulator n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KXB9_OSCVS
putative LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:BAL00928.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
SCNpilot_cont_750_bf_scaffold_481_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3861..5954)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L0_CLOSV rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS08803.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
SCNpilot_cont_750_bf_scaffold_481_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5951..6757)
DNA (807bp) protein (269aa)
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L6_CLOSV rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EDS08809.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type sugar transport system, permease component
SCNpilot_cont_750_bf_scaffold_481_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6760..7656)
DNA (897bp) protein (299aa)
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L5_CLOSV rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EDS08808.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type sugar transport systems, permease components rbh
SCNpilot_cont_750_bf_scaffold_481_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7758..9047)
DNA (1290bp) protein (430aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVV0_9FIRM rbh
ABC-type sugar transport system, periplasmic component rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL21753.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
SCNpilot_cont_750_bf_scaffold_481_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9095..10447)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVU9_9FIRM rbh
Protein of unknown function (DUF2961). rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL21752.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
SCNpilot_cont_750_bf_scaffold_481_12
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11200..14118)
DNA (2919bp) protein (973aa)
hypothetical protein n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI0003771869 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM11891.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Peptidoglycan-binding LysM rbh
SCNpilot_cont_750_bf_scaffold_481_13
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14115..14558)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003760211
Uncharacterized protein {ECO:0000313|EMBL:KGM17916.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_481_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14555..14980)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000373D9F9
Membrane protein {ECO:0000313|EMBL:KGM12784.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
TadE-like protein
SCNpilot_cont_750_bf_scaffold_481_15
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14977..15390)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00037AE89E
Uncharacterized protein {ECO:0000313|EMBL:KGM12783.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
TadE family protein
SCNpilot_cont_750_bf_scaffold_481_16
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15390..15590)
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM12819.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_750_bf_scaffold_481_17
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15603..16502)
DNA (900bp) protein (300aa)
Type II secretion system F domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7F0_GEOOG
Type II secretion protein F {ECO:0000313|EMBL:EYR65233.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Type II secretion system F domain-containing protein
SCNpilot_cont_750_bf_scaffold_481_18
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16499..17362)
DNA (864bp) protein (288aa)
Type II secretion system F domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7E9_GEOOG
Membrane protein {ECO:0000313|EMBL:EYR65234.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Type II secretion system F domain-containing protein
SCNpilot_cont_750_bf_scaffold_481_19
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17359..18798)
DNA (1440bp) protein (480aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ3_BLASD rbh
ATP/GTP-binding protein {ECO:0000313|EMBL:KGM03925.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Flp pilus assembly protein, ATPase CpaF rbh
SCNpilot_cont_750_bf_scaffold_481_20
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18795..19562)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N1Z8_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KGM11878.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_481_21
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19559..20236)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4UZR8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM12779.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_481_22
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20277..21080)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00036D90BB
ATP/GTP-binding protein {ECO:0000313|EMBL:EYR65238.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
putative ATP/GTP-binding protein
SCNpilot_cont_750_bf_scaffold_481_23
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21173..21778)
DNA (606bp) protein (202aa)
Putative secreted protein/lipoprotein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G440_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EYR65239.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_750_bf_scaffold_481_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21983..22849)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000370D712
Uncharacterized protein {ECO:0000313|EMBL:EYR65314.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_750_bf_scaffold_481_25
unknown

Not on your lists

23294..23566
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_481_26
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23736..24683
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T9X9_MYCVP
Mycobacterium llatzerense strain CLUC14 Mllat_contig000095, whole genome shotgun sequence {ECO:0000313|EMBL:KIU13545.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_481_27
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25105..25302
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR62729.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_750_bf_scaffold_481_28
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25570..26136
DNA (567bp) protein (189aa)
Transcriptional regulator, TetR family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C059_BEUC1
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM15915.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_481_29
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26146..26655
DNA (510bp) protein (170aa)
Transcriptional regulator, MarR family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6P7_CELGA
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEI11107.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_750_bf_scaffold_481_30
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26652..27881
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK35_CELFN rbh
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG73777.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Displaying items 1-30 of 88 in total

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