ggKbase home page

SCNpilot_cont_750_bf_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 791 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_143_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3..308
DNA (306bp) protein (102aa)
30S ribosomal protein S1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWK8_LEIAQ
30S ribosomal protein S1 {ECO:0000313|EMBL:ERK72914.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S1
SCNpilot_cont_750_bf_scaffold_143_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

387..989
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Dephospho-CoA kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCE7_LEIAQ rbh
dephospho-CoA kinase
SCNpilot_cont_750_bf_scaffold_143_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1052..3118
DNA (2067bp) protein (689aa)
UvrABC system protein B n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVX9_LEIAQ rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
excinuclease ABC subunit B rbh
SCNpilot_cont_750_bf_scaffold_143_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3134..3868
DNA (735bp) protein (245aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE00_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72917.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_143_5
unknown

Not on your lists

3865..4374
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036006FF
SCNpilot_cont_750_bf_scaffold_143_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4430..5431
DNA (1002bp) protein (334aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RJY2_LEIAQ rbh
ATPase family protein {ECO:0000313|EMBL:ERK69211.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_750_bf_scaffold_143_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5428..6786
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037ACDDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG76289.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_750_bf_scaffold_143_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6783..7301
DNA (519bp) protein (173aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3Z6_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72223.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_143_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7461..10415
DNA (2955bp) protein (985aa)
UvrABC system protein A n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUK1_LEIAQ rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A rbh
SCNpilot_cont_750_bf_scaffold_143_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10425..12428
DNA (2004bp) protein (668aa)
UvrABC system protein C n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAE1_LEIAQ rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
excinuclease ABC subunit C rbh
SCNpilot_cont_750_bf_scaffold_143_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12542..13222
DNA (681bp) protein (227aa)
SNARE-like domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTW9_LEIAQ rbh
SNARE-like domain protein {ECO:0000313|EMBL:ERK72226.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_143_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13219..14460
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003698809 rbh
Histidine kinase {ECO:0000313|EMBL:ERK69467.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two component system sensor kinase
SCNpilot_cont_750_bf_scaffold_143_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14457..15128
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SIC5_LEIAQ rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK62402.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LuxR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_143_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15288..16619
DNA (1332bp) protein (444aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2S9V2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK62403.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
acyltransferase rbh
SCNpilot_cont_750_bf_scaffold_143_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16654..17529
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein N136_04038 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RM47_LEIAQ rbh
Nucleotide-binding protein N136_04038 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_143_16
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17588..18568
DNA (981bp) protein (327aa)
sporulation protein n=1 Tax=Microbacteriaceae RepID=UPI00035C8711 rbh
hypothetical protein rbh
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_143_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18694..19320
DNA (627bp) protein (209aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Superoxide dismutase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T682_LEIAQ rbh
superoxide dismutase rbh
SCNpilot_cont_750_bf_scaffold_143_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19423..19881
DNA (459bp) protein (153aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE52_LEIAQ
glyceraldehyde 3-phosphate dehydrogenase
SCNpilot_cont_750_bf_scaffold_143_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19842..20357
DNA (516bp) protein (172aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
gapA; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE52_LEIAQ
SCNpilot_cont_750_bf_scaffold_143_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20373..21590
DNA (1218bp) protein (406aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Phosphoglycerate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW32_LEIAQ rbh
phosphoglycerate kinase rbh
SCNpilot_cont_750_bf_scaffold_143_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21578..22381
DNA (804bp) protein (268aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Triosephosphate isomerase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCJ3_LEIAQ rbh
triosephosphate isomerase rbh
SCNpilot_cont_750_bf_scaffold_143_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22472..22717
DNA (246bp) protein (82aa)
Preprotein translocase, SecG subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWR0_LEIAQ
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ERK72944.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
SCNpilot_cont_750_bf_scaffold_143_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22744..23109
DNA (366bp) protein (122aa)
RNA polymerase-binding protein RbpA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T669_LEIAQ
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
electron transport protein
SCNpilot_cont_750_bf_scaffold_143_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23256..24026)
DNA (771bp) protein (257aa)
6-phosphogluconolactonase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE38_LEIAQ rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:ERK72942.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
6-phosphogluconolactonase rbh
SCNpilot_cont_750_bf_scaffold_143_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24023..24985)
DNA (963bp) protein (321aa)
Putative opcA protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW18_LEIAQ rbh
Putative opcA protein {ECO:0000313|EMBL:ERK72941.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
oxppcycle protein rbh
SCNpilot_cont_750_bf_scaffold_143_26
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26415..28025)
DNA (1611bp) protein (537aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
glucose-6-phosphate isomerase n=1 Tax=Leifsonia sp. 109 RepID=UPI00037B3D41
glucose-6-phosphate isomerase
SCNpilot_cont_750_bf_scaffold_143_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28022..29134)
DNA (1113bp) protein (371aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
tal2; transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] rbh
Transaldolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R3R2_LEIAQ rbh
SCNpilot_cont_750_bf_scaffold_143_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29162..30550)
DNA (1389bp) protein (463aa)
Transketolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMV0_LEIAQ
Transketolase {ECO:0000313|EMBL:ERK69894.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transketolase
SCNpilot_cont_750_bf_scaffold_143_29
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30490..31185)
DNA (696bp) protein (232aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Transketolase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P6B7_LEIXC
transketolase
SCNpilot_cont_750_bf_scaffold_143_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31521..32441
DNA (921bp) protein (307aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Protoheme IX farnesyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SXA6_LEIAQ rbh
protoheme IX farnesyltransferase rbh
Displaying items 1-30 of 791 in total

View Taxonomy