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SCNpilot_cont_750_bf_scaffold_199

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Displaying items 1-30 of 771 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_199_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


39..407
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBD2_LEIAQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_cont_750_bf_scaffold_199_2
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


411..770
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=2 Tax=Leifsonia RepID=U3P8Z8_LEIXC
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_199_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


770..1357
DNA (588bp) protein (196aa)
50S ribosomal protein L5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S9_LEIAQ rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L5 rbh
SCNpilot_cont_750_bf_scaffold_199_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1475..1873
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTY2_LEIAQ
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_cont_750_bf_scaffold_199_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1880..2416
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3F1_LEIAQ rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
SCNpilot_cont_750_bf_scaffold_199_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2419..2790
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBC7_LEIAQ
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L18
SCNpilot_cont_750_bf_scaffold_199_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2787..3494
DNA (708bp) protein (236aa)
30S ribosomal protein S5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT83_LEIAQ rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S5 rbh
SCNpilot_cont_750_bf_scaffold_199_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3494..3679
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S5_LEIAQ
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
SCNpilot_cont_750_bf_scaffold_199_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3679..4362
DNA (684bp) protein (228aa)
50S ribosomal protein L15 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTX7_LEIAQ rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L15 rbh
SCNpilot_cont_750_bf_scaffold_199_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4439..5761
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3E8_LEIAQ rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
preprotein translocase subunit SecY rbh
SCNpilot_cont_750_bf_scaffold_199_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5758..6369
DNA (612bp) protein (204aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aq
Adenylate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBC2_LEIAQ rbh
adenylate kinase rbh
SCNpilot_cont_750_bf_scaffold_199_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6378..7208
DNA (831bp) protein (277aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Methionine aminopeptidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT78_LEIAQ rbh
methionine aminopeptidase rbh
SCNpilot_cont_750_bf_scaffold_199_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7369..7590
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S1_LEIAQ
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_cont_750_bf_scaffold_199_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7669..7782
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTX2_LEIAQ
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
SCNpilot_cont_750_bf_scaffold_199_15
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7921..8226
DNA (306bp) protein (102aa)
30S ribosomal protein S13 n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RB70_CLAMS
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
SCNpilot_cont_750_bf_scaffold_199_16
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8265..8663
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Microbacteriaceae RepID=UPI00035C6A76
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_199_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8784..9779
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT73_LEIAQ rbh
DNA-directed RNA polymerase subunit alpha rbh
SCNpilot_cont_750_bf_scaffold_199_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9835..10386
DNA (552bp) protein (184aa)
50S ribosomal protein L17 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9R7_LEIAQ rbh
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_cont_750_bf_scaffold_199_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10461..11504
DNA (1044bp) protein (348aa)
Acetyltransferase, GNAT family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTW7_LEIAQ rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK71974.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative acetyltransferase, GNAT
SCNpilot_cont_750_bf_scaffold_199_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11498..13540)
DNA (2043bp) protein (681aa)
Acyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3D9_LEIAQ rbh
Acyltransferase {ECO:0000313|EMBL:ERK71973.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
yrhL; lipopolysaccharide modification acyltransferase rbh
SCNpilot_cont_750_bf_scaffold_199_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13596..14462
DNA (867bp) protein (289aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] rbh
tRNA pseudouridine synthase A n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBB4_LEIAQ rbh
SCNpilot_cont_750_bf_scaffold_199_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14399..14902)
DNA (504bp) protein (168aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZ23_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70468.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_750_bf_scaffold_199_23
unknown

Not on your lists

15620..16483
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_199_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16484..17122
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T707_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70472.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_199_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17133..17780)
DNA (648bp) protein (216aa)
Response regulator receiver domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZ28_LEIAQ rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK70473.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
two component system response regulator
SCNpilot_cont_750_bf_scaffold_199_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17777..19039)
DNA (1263bp) protein (421aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPI7_LEIAQ rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERK70474.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
baeS; two-component system sensor protein
SCNpilot_cont_750_bf_scaffold_199_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19310..19756
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5G4_LEIAQ
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L13
SCNpilot_cont_750_bf_scaffold_199_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19805..21613
DNA (1809bp) protein (603aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Phosphoglucosamine mutase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T712_LEIAQ rbh
phosphoglucosamine mutase rbh
SCNpilot_cont_750_bf_scaffold_199_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21633..21941)
DNA (309bp) protein (103aa)
DNA-binding helix-turn-helix protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZ33_LEIAQ
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK70478.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_199_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22028..22333)
DNA (306bp) protein (102aa)
DNA-binding helix-turn-helix protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPJ2_LEIAQ
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK70479.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
Displaying items 1-30 of 771 in total

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